NNNCCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTCCATAGTTCCTTGCTTATGAGATCAAAGGTGTCATCTCA
GGGACCAAAGGTTGTATAATTTCTCCAATGAAAATGAAGACAAAAATAAA
AATTAATGACAGTGGCTTAATATTCACTGAAGAAATCATCCTTCACCTAT
AAACACATCTTAAACCCCTGTCATGGATTCTGTGAATTCAGAGAGAAGCA
ATCTGAACTTTCTATAAGTCTTAAGTAGTTTTAACTTCTTGCTTAATACG
TCCACTCAACCTAAATTAATCAGTTCTGTAAAGAACAAGGTATTTCTTGA
AAAGAAAAGATGCCTAGATTCTCTGTGGAGTAAGTTATGACAAAAGCTGA
CAGGAGGGTTTACCTCTGAAGTATGCCTGCAAACATGCTATTATTGGCAT
CTGACAAGAGAGAGCCTCTAGAATTCTGTCTTATCTAGGCTTATCTTTCT
GAAAATTACCCAGGAGAAACAATCTAAGTGAAAGTATTTGCACTGGGTGA
TAGTTCCAGAGATAGTAATCCATGTGTAGCTGTCTGTATTATTTTTTTCC
TGGGCCTACAGTAAGGAAGACTATCATGGAGAAGGAACGTATTGATGTAG
ACATGCTCACCTCATGGCTGCCAGGAAGCAGAAAGTGCTTGAAGGTGTCC
GGGGTATGATTTGTCACATTTAAACTCATCAGCCTCAAAATTCCCAN

NCCCAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAATGAAAATGAAGGACCAACAT
ACCCCGAACTTTTGGGACACAAAGAAAGCAGTGGTAAGAGGAAAGTTTAT
AGTATAAAATGTCTTCATAAAGCTGCATATGTAGCAGAAGATGGCCTAGT
CGGCCATCATTGGGAAGAGAGGCCCCTTGGTCTAGCAAACTTTATAAGCC
TCAGTACAGGGGAATGCCGGGGCCAAGAAGTGGGAGTGAGTGGGTTGGGG
AGCAGGGCGGGGTGGGGTGAGTATAGGGGACTTTCAGGGTAGCATTTGAA
CTGTAAATAAAGAAAATATCTAATAAAAAAGAAAGAAAGAAAAGAAAAAG
AGAATCAGGCACAAGACAAGGCTGTTCAATCACTCCTTATTTCTTCAATA
TACTATGAGCTAGAGCATTAAGTCAACTAATGGACATCAAGGGGATACAA
ATTAGAAAGAAAAAAGTCAAAGTATCACTATTTGCAGGTGATATGATAGT
AAATATAGACAATCCCTACAATTCTACCGGAGAACCCCTACAGCTGATAA
ACATCTTCAGCAAAGTACCTGAGTACAAAATTCACTCAAAGAGATCAATA
ACCTGCTTTATACAAATGATAAAGGCACTAAGAAGTTAGGGAGACTACAA
TTGGTCTTAGCCAAAAGGCTGAGTGAGAAGCAAGAGGTAAGAGTGGGCAT
GTGG

Query= MSMg01no487_g12.b1 MSMg01no487_g12.b1 CHROMAT_FILE:
MSMg01no487_g12.b1 PHD_FILE: MSMg01no487_g12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:00 2005
         (693 letters)



>mm_chr3_48200779_48201871
          Length = 1093

 Score = 1301 bits (673), Expect = 0.0
 Identities = 685/693 (98%), Gaps = 8/693 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctccatag----ttccttgcttatgagatcaaaggtgtcatctcagggaccaaag 60
           |||||||||||||        |||||||||||||||||||||||||||||||||||||||
Sbjct: 893 gaattctccatagagaa----ttgcttatgagatcaaaggtgtcatctcagggaccaaag 838

                                                                       
Query: 61  gttgtataatttctccaatgaaaatgaagacaaaaataaaaattaatgacagtggcttaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 gttgtataatttctccaatgaaaatgaagacaaaaataaaaattaatgacagtggcttaa 778

                                                                       
Query: 121 tattcactgaagaaatcatccttcacctataaacacatcttaaacccctgtcatggattc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 tattcactgaagaaatcatccttcacctataaacacatcttaaacccctgtcatggattc 718

                                                                       
Query: 181 tgtgaattcagagagaagcaatctgaactttctataagtcttaagtagttttaacttctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tgtgaattcagagagaagcaatctgaactttctataagtcttaagtagttttaacttctt 658

                                                                       
Query: 241 gcttaatacgtccactcaacctaaattaatcagttctgtaaagaacaaggtatttcttga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gcttaatacgtccactcaacctaaattaatcagttctgtaaagaacaaggtatttcttga 598

                                                                       
Query: 301 aaagaaaagatgcctagattctctgtggagtaagttatgacaaaagctgacaggagggtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 aaagaaaagatgcctagattctctgtggagtaagttatgacaaaagctgacaggagggtt 538

                                                                       
Query: 361 tacctctgaagtatgcctgcaaacatgctattattggcatctgacaagagagagcctcta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tacctctgaagtatgcctgcaaacatgctattattggcatctgacaagagagagcctcta 478

                                                                       
Query: 421 gaattctgtcttatctaggcttatctttctgaaaattacccaggagaaacaatctaagtg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gaattctgtcttatctaggcttatctttctgaaaattacccaggagaaacaatctaagtg 418

                                                                       
Query: 481 aaagtatttgcactgggtgatagttccagagatagtaatccatgtgtagctgtctgtatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aaagtatttgcactgggtgatagttccagagatagtaatccatgtgtagctgtctgtatt 358

                                                                       
Query: 541 atttttttcctgggcctacagtaaggaagactatcatggagaaggaacgtattgatgtag 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 atttttttcctgggcctacagtaaggaagactatcatggagaaggaacgtattgatgtag 298

                                                                       
Query: 601 acatgctcacctcatggctgccaggaagcagaaagtgcttgaaggtgtccggggtatgat 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 acatgctcacctcatggctgccaggaagcagaaagtgcttgaaggtgtccggggtatgat 238

                                            
Query: 661 ttgtcacatttaaactcatcagcctcaaaattc 693
           |||||||||||||||||||||||||||||||||
Sbjct: 237 ttgtcacatttaaactcatcagcctcaaaattc 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1093
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1083
Effective search space:   739689
Effective search space used:   739689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)