NNNNCCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAAGGCCCATTCCTAAACATGATAAAAGCAATCTACACCAA
ACCAGTAGCCAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAACCCCAC
TAAAATCAGGGACTAGATAAAGCTGCTCACTTTCTCCCTACCTTTTCAAC
ATAGTACTTGAAGTATTAGCCAGAGCAATTCAACAACAAAAGGAGATTAA
GGGGATACAAATTGGAAAAGAGGAAGTCAAAATATCACTTTTTGCAGATG
ATATGATAGTATATATAAGTGACCCTAAAAATTCCACCAGAGAACTCCTA
AACCTGATAAACAGCTTCGGTGAAGTAGCTGGATATAAAATTAACTCAAA
CAAGTCAATGGCCTTTCTCTACACAAAGAATAAACAGGCTGAGAAAGATA
TTAGGGAAACAACACCCTTCTCAATAGTCACAAATAATATAAAATATCTC
TGCGTGACTCTAACTAAGGAAGTGGAAGATCTGTATGATAAAAACTTCAA
GTCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATCAAAGATCTCCC
ATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCCAA
AAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAGCTCAATTT
TTTAAAGAATTAGAAGGAGCAATTTGCAAATTCATCTGGAATAAN

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXGAAGAAAATTTATCTCCCTACCCTTTC
TTCCAGAGACATTTATCTACTTACAGATATGCAAAAAGGAATCGGGCTTC
TTTAGCTCCATGAGATATCATTATATGGCTGTCAGTCCTGATGGAGGGGC
CTCAACCATCCACCTCTCCCATCATGACAGAATGTTGGCAGCCAAATACA
ACTGTAAAAGTGCCTCCTGCACGTGGATCCTTTCTCTAGACCCTACATTG
CTTGCCCCATGCCTTCTGTGATTGAGCTTTGAAAAGAGCTGATACAGAAA
TTCCATTTGTGCCTGAGCACTGCATTTCATGCATGGATCTATCCCATAAT
TAGCCTCCAAATGATGACACCATTGCATACACTAGCAAGATTTTGCTGAA
AGGACCCTGATATAGCTGTCTCTTGTGAGACTAGGCCGGGGCCTAGCAAA
CACATAAGTAGATGCTCACAGTCAGCTATTGGATGGAGCACAGGGCCCCC
AATGGAGCAGCTAGAGAAAGTATCCAAGGAGCTAAAGAGATCTGCAACCC
TGTAGGTGCAACAACATTATGAACTAACCAGTACCCTGGAGCTCTTGACT
CTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGA
GAGGCCCATTGGACACGCAAACTTTATATGCCCCAGTACAGGGGAACACC
AGGGCCAAAAAGGGTGAGTGGTGGGG

Query= MSMg01no487_k24.g1 MSMg01no487_k24.g1 CHROMAT_FILE:
MSMg01no487_k24.g1 PHD_FILE: MSMg01no487_k24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:22 2005
         (664 letters)



>mm_chr3_125437674_125438740
          Length = 1067

 Score = 1081 bits (559), Expect = 0.0
 Identities = 639/667 (95%), Gaps = 3/667 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaagaaaatttatctccctaccctttcttccagagacatttatctacttacagatatgca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaagaaaatttatctccctaccctttcttccagagacatttatctacttacagatatgca 260

                                                                       
Query: 61  aaaaggaatcgggcttctttagctccatgagatatcattatatggctgtcagtcctgatg 120
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagaggaatcgggcttctttagctccatgagatatcattatatggctgtcagtcctgatg 320

                                                                       
Query: 121 gaggggcctcaaccatccacctctcccatcatgacagaatgttggcagccaaata---ca 177
           ||||||||||||||| |||||||||||||||||||||||||||||||||||||||   ||
Sbjct: 321 gaggggcctcaaccacccacctctcccatcatgacagaatgttggcagccaaatataaca 380

                                                                       
Query: 178 actgtaaaagtgcctcctgcacgtggatcctttctctagaccctacattgcttgccccat 237
           |||||||||||||||||||||||||| ||||||||| |||||||||||| ||||| ||||
Sbjct: 381 actgtaaaagtgcctcctgcacgtggctcctttctccagaccctacattccttgctccat 440

                                                                       
Query: 238 gccttctgtgattgagctttgaaaagagctgatacagaaattccatttgtgcctgagcac 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccttctgtgattgagctttgaaaagagctgatacagaaattccatttgtgcctgagcac 500

                                                                       
Query: 298 tgcatttcatgcatggatctatcccataattagcctccaaatgatgacaccattgcatac 357
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 501 tgcatttcatgcatggatctatcccataatcagcctccaaatgatgacaccattgcatac 560

                                                                       
Query: 358 actagcaagattttgctgaaaggaccctgatatagctgtctcttgtgagactaggccggg 417
           |||||||||||||| |||||||||||| ||| ||||||||||||||||||||| ||||||
Sbjct: 561 actagcaagattttactgaaaggacccagatgtagctgtctcttgtgagactatgccggg 620

                                                                       
Query: 418 gcctagcaaacacataagtagatgctcacagtcagctattggatggagcacagggccccc 477
           |||||||||||||| |||| |||||||||||||||||| |||||||| |||||||| |||
Sbjct: 621 gcctagcaaacacagaagtggatgctcacagtcagctaatggatggatcacagggctccc 680

                                                                       
Query: 478 aatggagcagctagagaaagtatccaaggagctaaagagatctgcaaccctgtaggtgca 537
           ||||||| |||||||||||||| |||||||||||||| || || ||||||| |||||| |
Sbjct: 681 aatggaggagctagagaaagtacccaaggagctaaagggaacttcaaccctataggtgga 740

                                                                       
Query: 538 acaacattatgaactaaccagtaccctggagctcttgactctagctgcatatgtatcaaa 597
           |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 741 acaacattatgaactaaccagtaccccggagttcttgactctagctgcatatgtatcaaa 800

                                                                       
Query: 598 agatggcctagtcggccatcactggaaagagaggcccattggacacgcaaactttatatg 657
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agatggcctagtcggccatcactggaaagagaggcccattggacacgcaaactttatatg 860

                  
Query: 658 ccccagt 664
           |||||||
Sbjct: 861 ccccagt 867


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1067
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1057
Effective search space:   691278
Effective search space used:   691278
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)