Query= MSMg01no488_h13.b1 MSMg01no488_h13.b1 CHROMAT_FILE:
MSMg01no488_h13.b1 PHD_FILE: MSMg01no488_h13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:24 2005
(661 letters)
>mm_chr3_81645198_81646254
Length = 1057
Score = 1154 bits (597), Expect = 0.0
Identities = 641/657 (97%), Gaps = 4/657 (0%)
Strand = Plus / Minus
Query: 5 gaattcaggatctcctcttccctttgctgactcatgattcaccagtgcttcctctaagat 64
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gaattcaggagctactcttccctttgctgactcatgattcaccagtgcttcctctaagat 637
Query: 65 tgaatgtgaaaagccaacttcattctttgaggaatgccattgctaaaatgcagtgtgaaa 124
|||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 636 tgaaagtgaaaagccaacttcattctttgaggaatggcattgttaaaatgcagtgtgaaa 577
Query: 125 tgctcagcagtaaatccagtgcctgcctccaagcagaaacaggagttcaaggtaatcctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tgctcagcagtaaatccagtgcctgcctccaagcagaaacaggagttcaaggtaatcctc 517
Query: 185 tgtaaaaaatgttaaaaaaaaatgtaaaagaagccaccttgaatccttgtgaagagtggt 244
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 516 tgtaaaaaatgtt--taaaaaatgtaagagaagccaccttgaatccttgtgaagagtggt 459
Query: 245 cccttccactgtcacatgacactgtcctaatatatattctattgggtcagaatgaccttc 304
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 458 cccttccactgtcacatgacactgtcctaagatatattctattgggtcagaatgaccttc 399
Query: 305 agtactcagagaacagtagacaaggtctcagagcacttgctcacttctcacatggaaaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 agtactcagagaacagtagacaaggtctcagagcacttgctcacttctcacatggaaaga 339
Query: 365 caagctttggagacaggagatgatgggctctggaacaaaagggaaacaaaggtttcactg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 caagctttggagacaggagatgatgggctctggaacaaaagggaaacaaaggtttcactg 279
Query: 425 aagatttgggaaaaacaaatgctgtcagatgcaaagagttacggataatgaataactata 484
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 278 aagatttgggaaaaacaaatgctgtcagatgc--agagttagggataatgaataactata 221
Query: 485 tatgaagggagttacctgttgcatgacatttacttacattgttaaccccaagactgtgaa 544
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 tatgaagagagttacctgttgcatgacatttacttacattgttaaccccaagactgtgaa 161
Query: 545 ctgaaaaaacctgtttcttgtattgtgcctcagccctaaaacacagctttatcctaagag 604
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 160 ctgaaaaaacctgtttcttgtattgtgcctcagccctaaaacacagctttaccctaagag 101
Query: 605 ctttctgtttactgttaacaagtaattgtgatgtggctcagacttagcacacacctt 661
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 ctttctgtttactgtaaacaagtaattgtgatgtggctcagacttagcacacacctt 44
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1057
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1047
Effective search space: 681597
Effective search space used: 681597
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_h13.g1 MSMg01no488_h13.g1 CHROMAT_FILE:
MSMg01no488_h13.g1 PHD_FILE: MSMg01no488_h13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:24 2005
(596 letters)
>mm_chr3_81522845_81523837
Length = 993
Score = 1093 bits (565), Expect = 0.0
Identities = 588/597 (98%), Gaps = 5/597 (0%)
Strand = Plus / Plus
Query: 1 cagagtgggaatcattcagcatagaaaaagacacagatctctagagaaaaccaattatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagagtgggaatcattcagcatagaaaaagacacagatctctagagaaaaccaattatgt 260
Query: 61 aacactagctcacaattctctagttatccttgtgtggcagcagatagtattaatcttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacactagctcacaattctctagttatccttgtgtggcagcagatagtattaatcttcca 320
Query: 121 aaacccttaggtatttaccagagtaagcaactggaatagatatgactttcatggtatgat 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 aaacccttaggtatttaccagagtaagcaaccggaatagatatgactttcatggtatgat 380
Query: 181 gtatgatatttgattcaatgaatcaaaaatattactaaatatttgataatcacttcttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtatgatatttgattcaatgaatcaaaaatattactaaatatttgataatcacttcttag 440
Query: 241 gttctgnt-gattgtattataagtaatatgaccatagatctaatttttatggctctaacc 299
| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcactg-tagattgtattataagtaatatgaccatagatctaatttttatggctctaacc 499
Query: 300 atcaaaaaaaaaaaactttaagctaaaccttacacaatacacacaagctcaacaatcagt 359
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 500 atcaaaaaaaaa---ctttaagctaaaccttacacaatacacacaagatcaacaatcagt 556
Query: 360 aaaaatacgaaaggacaaacatggttaccttggtattactgaaaagaaaccctgctatcc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aaaaatacgaaaggacaaacatggttaccttggtattactgaaaagaaaccctgctatcc 616
Query: 420 agttggtttacaagtgagaatgcattatggaagtaagagtataactgagatgctatgatg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 agttggtttacaagtgagaatgcattatggaagtaagagtataactgagatgctatgatg 676
Query: 480 acagcaaaaacagagtactgtgggtctactgagaactgggaagtgaagtggaacggtgag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 acagcaaaaacagagtactgtgggtctactgagaactgggaagtgaagtggaacggtgag 736
Query: 540 aatgtgtgaaagagagggaaggcacctgactggccaagagcatttagagataatggt 596
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 aatgtgtgaaagagagggaaggcacctgactggccaagagcatttagagataatggt 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 993
Length adjustment: 10
Effective length of query: 586
Effective length of database: 983
Effective search space: 576038
Effective search space used: 576038
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
