XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTCCT
CGCACCTTGAGATAAGACTTTATTGTTAGATGAAATCAGTCAAGTAAAAA
CAAAAAGGAAAGGAAAGCCTTCCACACAAGAGCCCTAAAGATAAGCAGAA
GATTTCCATCAGAAAATGGCTCATTGTGCTGTAAAAGCTGAAATGATGAC
TGGGAGCCTGGAGAAGAAAGTAGGGGCAGGTCATGAAGAGCCTTGTATTG
CTGGTCAGGAGATCCGAGTTTTGCTCTATGTGCAATATGCTCATAATGTG
GTATTTTAAGCAAGTCTCAAATGTGCCCTTTATTTTCTAGAAGAGGATTG
GGGAACATTCAGTGGGGAATAAATCCATGGATAAGTGGTAAATGGATATA
GAAAGACCTAAGCAAATCAAGATGATGGCAATGCTTCTGAAGAAAACTCA
TCAGGCACAGGGAATGCTTTGAACTTACAAATAAGGTTTTGGTGAATATG
ATTCATTTCATATTCAAGGGAAGGAAGATACAGAAATTAACTTTTGGATT
TGGAAATCAGCTATTTTTGGTAGTAATGGCATTTAAAGAGGAAAAATATG
AATAGAACATATTTATTGTGAATTAAATTAGGTAATAAAAGAAAAGATAT
TTGAAACTAAGGGGAAAAGACTACGTTGATGATTATGGCTGAAGCAT

GCCGGGTCAAAAGAGAGGGTAGGTGACACTATAGAATGCTAAAAGGAGAT
CTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATGCTCAA
CATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCAC
CTCACACCAGTCAGAATAGCTAAGATCAAAAATTCAGGTGACAGCAGATG
CTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATT
GCAGGCTTGTACAACCACTCTGGAGATCAGTCTGGCGGTTTTTTTTAAAA
CTGGATATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATATA
TCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCA
TAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAGGAACCCAGATGCCCC
TCAACAGAGGAATGGATACAGAAGATGTGGTACATCTACACAATGGAGTA
CTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTGGCCAAATGGA
TGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGGAAC
TCACACAATATGTACTCACTGATAAGTGGATATTAGCCCAAAACCTAAGA
TACCCAA

Query= MSMg01no488_o08.b1 MSMg01no488_o08.b1 CHROMAT_FILE:
MSMg01no488_o08.b1 PHD_FILE: MSMg01no488_o08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:56 2005
         (635 letters)



>mm_chr3_72625172_72626206
          Length = 1035

 Score = 1120 bits (579), Expect = 0.0
 Identities = 621/635 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   taagactttattgttagatgaaatcagtcaagtaaaaacaaaaaggaaaggaaagccttc 60
           |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 taagactttagtgttagatgaagtcagtcaagtaaaaacaaaaaggaaaggaaagccttc 260

                                                                       
Query: 61  cacacaagagccctaaagataagcagaagatttccatcagaaaatggctcattgtgctgt 120
           |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||
Sbjct: 261 cacacaagagccctaaagttaagcagaagatttcccccagaaaatggctcattgtgctgt 320

                                                                       
Query: 121 aaaagctgaaatgatgactgggagcctggagaagaaagtaggggcaggtcatgaagagcc 180
           ||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 321 aaaagctgaaatgatgactgggagcctggggaagaaagaaggggcaggtcatgcagagcc 380

                                                                       
Query: 181 ttgtattgctggtcaggagatccgagttttgctctatgtgcaatatgctcataatgtggt 240
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtattgctggtcaggagatctgagttttgctctatgtgcaatatgctcataatgtggt 440

                                                                       
Query: 241 attttaagcaagtctcaaatgtgccctttattttctagaagaggattggggaacattcag 300
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 attttaagcaagtctcaaatgtgccctttattttctacaagaggattggggaacattcag 500

                                                                       
Query: 301 tggggaataaatccatggataagtggtaaatggatatagaaagacctaagcaaatcaaga 360
           |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 501 tggggaataaatccatggataagtggtaaacggatatagaaagacgtaagcaaatcaaga 560

                                                                       
Query: 361 tgatggcaatgcttctgaagaaaactcatcaggcacagggaatgctttgaacttacaaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgatggcaatgcttctgaagaaaactcatcaggcacagggaatgctttgaacttacaaat 620

                                                                       
Query: 421 aaggttttggtgaatatgattcatttcatattcaagggaaggaagatacagaaattaact 480
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 621 aaggttttggtgaatatgattcatttcagattcaagggaaggaagatacagaaattaact 680

                                                                       
Query: 481 tttggatttggaaatcagctatttttggtagtaatggcatttaaagaggaaaaatatgaa 540
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 681 tttggatttggaaatcagctatttttggtagtaatggcatttaaagaggaaaaatatgga 740

                                                                       
Query: 541 tagaacatatttattgtgaattaaattaggtaataaaagaaaagatatttgaaactaagg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tagaacatatttattgtgaattaaattaggtaataaaagaaaagatatttgaaactaagg 800

                                              
Query: 601 ggaaaagactacgttgatgattatggctgaagcat 635
           |||||||||||||||||||||||||||||||||||
Sbjct: 801 ggaaaagactacgttgatgattatggctgaagcat 835


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space:   640625
Effective search space used:   640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)