Query= MSMg01no489_h11.b1 MSMg01no489_h11.b1 CHROMAT_FILE:
MSMg01no489_h11.b1 PHD_FILE: MSMg01no489_h11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:42 2005
(501 letters)
>mm_chr3_43095527_43096427
Length = 901
Score = 953 bits (493), Expect = 0.0
Identities = 499/501 (99%)
Strand = Plus / Plus
Query: 1 tgttgggtgccccatatcagatggtgtgtgctgtctgtttggtgatctagtgttgaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttgggtgccccatatcagatggtgtgtgctgtctgtttggtgatctagtgttgaaata 260
Query: 61 tctcgggggtccagattaattaagactgctggctctcctatatgatcacccttctcctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctcgggggtccagattaattaagactgctggctctcctatatgatcacccttctcctca 320
Query: 121 aattctttcagccttcccaaattcaacaacagctgcttctgtccattggttgggtgcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattctttcagccttcccaaattcaacaacagctgcttctgtccattggttgggtgcaaa 380
Query: 181 tatatgcatctgactctttcagctgcttgttgggtctttcggagggcactgacttaactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatatgcatctgactctttcagctgcttgttgggtctttcggagggcactgacttaactt 440
Query: 241 cttaattataatcaataaataacagaaacttacaaagtaaccctttgtttaattaaaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttaattataatcaataaataacagaaacttacaaagtaaccctttgtttaattaaaaga 500
Query: 301 agtcttagtgtgccaaaaatgacccagagactatcaatgtgttaatatcttgtggttctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtcttagtgtgccaaaaatgacccagagactatcaatgtgttaatatcttgtggttctg 560
Query: 361 tgttaaagtctatggcggccaatacaattatcatcaacccagtagcttataagcattggg 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgttaaagtctatggtggccaatacaattatcatcaacccagtagcttataagcattggg 620
Query: 421 gattagttcttgtagttcaaggaagaggattacaaagtctaaaatccatggataggtttt 480
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 gattagttcttgtagttcaaggaagaggattacaaagtcaaaaatccatggataggtttt 680
Query: 481 gaagaaggttctattttggct 501
|||||||||||||||||||||
Sbjct: 681 gaagaaggttctattttggct 701
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no489_h11.g1 MSMg01no489_h11.g1 CHROMAT_FILE:
MSMg01no489_h11.g1 PHD_FILE: MSMg01no489_h11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:42 2005
(598 letters)
>mm_chr3_43221184_43222181
Length = 998
Score = 1104 bits (571), Expect = 0.0
Identities = 592/599 (98%), Gaps = 2/599 (0%)
Strand = Plus / Minus
Query: 1 ctgctgaatcaatgtgttcctgtaatagctgtttggcaacagagggaaaaggcttctaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ctgctgaatcaatgtgttcctgtaatagctgtttggcaacagagggaaaaggcttctaaa 739
Query: 61 gctaaagtaagagttaggagatctatggaaaagtttccacagaaatcatcacagccacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gctaaagtaagagttaggagatctatggaaaagtttccacagaaatcatcacagccacta 679
Query: 121 ctgtgcaaggcttgcctcactatgtgattcctatgcacctctagtgtctccagagagaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ctgtgcaaggcttgcctcactatgtgattcctatgcacctctagtgtctccagagagaca 619
Query: 181 cagaacccactgaagtgaaggatcatattaaggttgtaattcctacaagactatctacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cagaacccactgaagtgaaggatcatattaaggttgtaattcctacaagactatctacat 559
Query: 241 atggggctgctaagagacaattaagaatgactgacttcatcaggttgaggccccaatcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 atggggctgctaagagacaattaagaatgactgacttcatcaggttgaggccccaatcac 499
Query: 301 agaatactggtgtgataccctaatattaaggagaaccagagagaactttgaagaagtgag 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 agaatactggtgtggtaccctaatattaaggagaaccagagagaactttgaagaagtgag 439
Query: 361 gtcatatgaggacacactaagtggcaactgtgtgcagttcaagaagatcctttgtggaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gtcatatgaggacacactaagtggcaactgtgtgcagttcaagaagatcctttgtggaca 379
Query: 421 aggtattggtttctttctatctagaactgcaaaacataaaagttgtagagcaaaaatttg 480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 378 aggtattggtttctttctatctagaagtgcaaaacataaaagttgtagagcaaaaatttg 319
Query: 481 agataatgtttccatcaatacacatttcaatccatgtgtaccaaatgtctaaaaagtaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 agataatgtttccatcaatacacatttcaatccatgtgtaccaaatgtctaaaaagtaat 259
Query: 541 tcaagatttgaccaataaccaatttttaggaaactata-agtgatgttataaaaaataa 598
||||||||| ||| |||||||||||| ||||||||| | ||||||||||||||||||||
Sbjct: 258 tcaagatttaacccataaccaattttaaggaaacta-acagtgatgttataaaaaataa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
