NNNCCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCATATGTGTGCCAGCTTGTTATTAATAGAGGAATCTCAAAT
GGCTGAGAAAAGTTTAAAGAAATGTTAATATCCTTAGCCAGCAGGGAAAT
GCAAATCAAAACCACTTTGAGATTCCCTCCTACACCTGTCAGAGTAGTTA
AGATCAATAATATAAGTGACAGCTCATGCTGGGGAGGATGTAGAGCAAGG
GGACCACTTCTCCATTGCTGGTGGGAGTGCAAACATGTCATGCCACTTTG
GAAATCGATATAGCTCTTCCTCAGAAAATTGGGAATTGATCTACCTCTGA
ACCCAACTATACTACTCCTGGGCATATACCTAAAGGATGATCCATCTTAC
AACAAATAAGTTCACAGTGGCTTACTCATAATAGCCAGAATCTGAAAATA
CCCTAGATATTGTTCAACTGAAAAATGGATAAAGAAAATGTGGTGTGTTT
ACACAATGGAATATTACTCAGCAGTTTAAAAAAATGACTTCATGAAATTT
GTCAAAAAATGCATAGACCTAGAAAAAAAATAGTATCAAGTGAGGGTAAC
CCAGACCTAGAAAGACAAACATGGTATATAGTCAGTTAAGTAGACATCAC
CTGTTTAATAAATGATAACCAAGCCATGATTCACAGACCCAGAGAAGCTA
AGAAACAAGGAAGAAGCTAGGTGAGATATATGAAACCTTCCNTAGAAGGT
ACCTANGNTAGAATAGATTGTGTGGGTGGGN

NNCCGATGATAGGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTGATTCTGCCCGCGACTTTTAGAAA
CAATCATAATGCCAGTTACAGTGCTCACACAGACTTGTTCTTCAATACTG
TACTCCCAGAGTATTTCTTGTTGGTGTTAATCAAGGGAAAATCAGAATCA
AACAGAATAAACTAAAACAAAGAACTGAATATAACCATGGGAGGTAAAGT
ACACAGAGAAATCACTGTGTGTATCCTTTGCCTCAGCACCCACATTACAA
ATTCTTGTAATTTCTCTGTTTAGTGTCTAAATGTATCTGCTCTTTAATTG
CTTTGAATTATTCAGATGTGAGTATCTCAGACTCGCTTGGTAAAAGAAAC
CAATAAATCATGTCTTAGAAATGTAAATAGCATACATGTGCATATTATTA
CATACCATTTTTTAATGTTAGCATTATTTTGAATTTAAATGTTCACTGGC
AAAATTGAAAGCTATTCAATTAGAGTCTCTGTAATATATTTATTTATTTG
TTGCTACCTGTAAGGTTTACAATGTCAAAGCAAATGACAATTAGTATCTA
ATAAACAAATATATGCATAAACACATTTGCACTAAAAATAATGGCTTAGA
AAATAGACATGGAAATCATAAGATCCTTAATATCATGACTGCATTACTTT
CAATCACGAACTTTTTCAAGACTACATGTATTATAAAACAAGATTTTTAA
AACACCCATCATTTAAA

Query= MSMg01no489_h14.g1 MSMg01no489_h14.g1 CHROMAT_FILE:
MSMg01no489_h14.g1 PHD_FILE: MSMg01no489_h14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:43 2005
         (627 letters)



>mm_chr3_80276238_80277264
          Length = 1027

 Score = 1089 bits (563), Expect = 0.0
 Identities = 611/627 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgattctgcccgcgacttttagaaacaatcataatgccagttacagtgctcacacagact 60
           |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 tgattctgcccatgacttttagaaacaatcataatgccagttacagtgctcacacagact 768

                                                                       
Query: 61  tgttcttcaatactgtactcccagagtatttcttgttggtgttaatcaagggaaaatcag 120
           |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 767 tgttcttctatactgtactcccagagtattttttgttggtgttaatcaagggaaaatcag 708

                                                                       
Query: 121 aatcaaacagaataaactaaaacaaagaactgaatataaccatgggaggtaaagtacaca 180
           || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 707 aagcaaacagaataaactaaaacaaagaactgaatataagcatgggaggtaaagtacaca 648

                                                                       
Query: 181 gagaaatcactgtgtgtatcctttgcctcagcacccacattacaaattcttgtaatttct 240
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gagaaaccactgtgtgtatcctttgcctcagcacccacattacaaattcttgtaatttct 588

                                                                       
Query: 241 ctgtttagtgtctaaatgtatctgctctttaattgctttgaattattcagatgtgagtat 300
            ||   ||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 587 gtggacagtgtctaaatgtatttgctctttaattgctttgaattatccagatgtgagtat 528

                                                                       
Query: 301 ctcagactcgcttggtaaaagaaaccaataaatcatgtcttagaaatgtaaatagcatac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 527 ctcagactcgcttggtaaaagaaaccaataaatcatgtcttagaaatgtaaatagaatac 468

                                                                       
Query: 361 atgtgcatattattacataccattttttaatgttagcattattttgaatttaaatgttca 420
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 atatgcatattattacataccattttttaatgttagcattattttgaatttaaatgttca 408

                                                                       
Query: 421 ctggcaaaattgaaagctattcaattagagtctctgtaatatatttatttatttgttgct 480
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 407 ctggcaaaattgaaagctattcaattagagtctctgtaatatatctatttatttgttgct 348

                                                                       
Query: 481 acctgtaaggtttacaatgtcaaagcaaatgacaattagtatctaataaacaaatatatg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 acctgtaaggtttacaatgtcaaagcaaatgacaattagtatctaataaacaaatatatg 288

                                                                       
Query: 541 cataaacacatttgcactaaaaataatggcttagaaaatagacatggaaatcataagatc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 cataaacacatttgcactaaaaataatggcttagaaaatagacatggaaatcataagatc 228

                                      
Query: 601 cttaatatcatgactgcattactttca 627
           |||||||||||||||||||||||||||
Sbjct: 227 cttaatatcatgactgcattactttca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space:   627489
Effective search space used:   627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)