XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
TCACGTTTCCCAACTTGAGCCACGGTCATTTTGGTCTGTTGTTATAACTA
ATAAGGATAAGCCTTTAAGATGGTTTTAGATAAGCTGTGGTAGCTTACAG
ATACCTCTGTCTACACACAGGTACCAGTGTGCATATCTTTGACATGTCTA
TTTTGCAATTTCTGTTTGCCCATGTCTCTATGCAGGATCTCGTGGTTTTG
ATTTGTGCTTTTATTTTTAGCTTTTAACTGTGTGTGTGTGATGTGCTTGG
GTCCCCAGAGAATCCAGAAGAGGGGTTCAGATCACCATGGGGCCGGAATT
CTATATAGGCAGGTGTGAGTACTTGATGTGGGTGCTGGAAACAAATGAAG
CTCTTGTGGAAGAGCAGGAAGTACTCTTCACCCCCAGTCAACTCTCCAGC
CCCGGTTTGGGCTTTTCTGAGGCAACGAGTGCCCTTGTACAGGATCTGAG
ATACAGTACAGTCGGCCTCTTACTCCAGTAGATTGCTGGGCTTCCTCAAC
CCTGCCAGTATCATTAAGTCAGCAGAGATTCAGCACACAGGTATAGGAAG
AGCCAGCCGCAGAGGATGTGCAAGGCTGGCCTTCCAAATAGACAAAGCAG
AGAAAAGGCTGTCTGCTCTCTGGNCCCTGGTTGCTACCAGGCAAAGAAAG
CTTTTATTTGTGTAACAGATGAGCTCTGGGTACCN

CTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTGTAAGAAGTCGGGTGAGCAAGCTATGAGGA
GCAAGCCAATAGGGAGCAGCCCTCCATCGTCTCTATGTTAGCTCCAGGTC
TCTGCCCTGTTTGAATTCTTGTCCTGGCTTTCTTCAATGATGGACTGCAG
TGGTGAAGTGAGCTTGGAAGATAAGAATGTTGAGAGTATTGTGGATGATG
GAGCCTGGCTTGTGAAAGTTCAGAGGAAAGCAAAGACTCTGCTGGCCGTT
TATGGGAAGGATTTTGTGATGTCTAAAAAATTGGCTGTGATTAACAGCAG
ACCAGAACGGCCAAAGTGAAACATTTGCTTTACAGGAACAATTGATAGTG
GTTAGCTGAAGCTGAAATAATATCAGTGATTCAGAAAAACAAAACAAAAC
AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACACCCAGCATC
ATTGAGGCCAAATCTTCTGGGAGGTATTTCCTGAGAGTCAGCGCAGAGAA
GCTGTGTTCTAGAGCTTGTGTGGTCAAGGTTGTACCTCACACTGGCAACT
GAACTTGGTTGTGTAAGAGTCACCCAAGTGGTACAGTTTTGAAGGCATGA
AGGGGTCATGATAGGCATCTGGGGCTTGGCACTGTGAGAGGCCAGGGGAG
GCCATTGGTGAAATACAGCCCAGCATTTTGGA

Query= MSMg01no492_e20.b1 MSMg01no492_e20.b1 CHROMAT_FILE:
MSMg01no492_e20.b1 PHD_FILE: MSMg01no492_e20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:30 2005
         (621 letters)



>mm_chr3_38556368_38557388
          Length = 1021

 Score = 1187 bits (614), Expect = 0.0
 Identities = 619/621 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccacggtcattttggtctgttgttataactaataaggataagcctttaagatggttttag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccacggtcattttggtctgttgttataactaataaggataagcctttaagatggttttag 260

                                                                       
Query: 61  ataagctgtggtagcttacagatacctctgtctacacacaggtaccagtgtgcatatctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataagctgtggtagcttacagatacctctgtctacacacaggtaccagtgtgcatatctt 320

                                                                       
Query: 121 tgacatgtctattttgcaatttctgtttgcccatgtctctatgcaggatctcgtggtttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgacatgtctattttgcaatttctgtttgcccatgtctctatgcaggatctcgtggtttt 380

                                                                       
Query: 181 gatttgtgcttttatttttagcttttaactgtgtgtgtgtgatgtgcttgggtccccaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatttgtgcttttatttttagcttttaactgtgtgtgtgtgatgtgcttgggtccccaga 440

                                                                       
Query: 241 gaatccagaagaggggttcagatcaccatggggccggaattctatataggcaggtgtgag 300
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaacccagaagaggggttcagatcaccatggggccggaattctatataggcaggtgtgag 500

                                                                       
Query: 301 tacttgatgtgggtgctggaaacaaatgaagctcttgtggaagagcaggaagtactcttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacttgatgtgggtgctggaaacaaatgaagctcttgtggaagagcaggaagtactcttc 560

                                                                       
Query: 361 acccccagtcaactctccagccccggtttgggcttttctgaggcaacgagtgcccttgta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acccccagtcaactctccagccccggtttgggcttttctgaggcaacgagtgcccttgta 620

                                                                       
Query: 421 caggatctgagatacagtacagtcggcctcttactccagtagattgctgggcttcctcaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caggatctgagatacagtacagtcggcctcttactccagtagattgctgggcttcctcaa 680

                                                                       
Query: 481 ccctgccagtatcattaagtcagcagagattcagcacacaggtataggaagagccagccg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccctgccagtatcattaagtcagcagagattcagcacacaggtataggaagagccagccg 740

                                                                       
Query: 541 cagaggatgtgcaaggctggccttccaaatagacaaagcagagaaaaggctgtctgctct 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cagaggatgtgcaaggctggccttccaaatagacaaagcagagaaaaggctgtctgctct 800

                                
Query: 601 ctggnccctggttgctaccag 621
           |||| ||||||||||||||||
Sbjct: 801 ctggtccctggttgctaccag 821


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space:   617721
Effective search space used:   617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)