Query= MSMg01no492_g04.b1 MSMg01no492_g04.b1 CHROMAT_FILE:
MSMg01no492_g04.b1 PHD_FILE: MSMg01no492_g04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:36 2005
(210 letters)
>mm_chr3_52558339_52558948
Length = 610
Score = 379 bits (196), Expect = e-110
Identities = 205/208 (98%)
Strand = Plus / Plus
Query: 1 agataaagctccactaggggccacctgccctcaatgacctgcaaggctttcaggaccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agataaagctccactaggggccacctgccctcaatgacctgcaaggctttcaggaccagc 260
Query: 61 tttcctgctctgtgcacctcctaccgagggctgcctcactggaaagacttgacttccagc 120
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttcgtgctctgcgcacctcctaccgagggctgcctcactggaaagacttgacttccagc 320
Query: 121 acacagggagggaggtgggactctgacttctacagtccatttggctttgcttccctttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacagggagggaggtgggactctgacttctacagtccatttggctttgcttccctttga 380
Query: 181 aaccattattgagaagctttccgagcac 208
| ||||||||||||||||||||||||||
Sbjct: 381 agccattattgagaagctttccgagcac 408
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 610
Length adjustment: 9
Effective length of query: 201
Effective length of database: 601
Effective search space: 120801
Effective search space used: 120801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no492_g04.g1 MSMg01no492_g04.g1 CHROMAT_FILE:
MSMg01no492_g04.g1 PHD_FILE: MSMg01no492_g04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:36 2005
(314 letters)
>mm_chr3_52700044_52700757
Length = 714
Score = 516 bits (267), Expect = e-151
Identities = 300/311 (96%), Gaps = 2/311 (0%)
Strand = Plus / Minus
Query: 1 ccactggctgatgaaatgttttcatattttatcatcttcctgcagagaacagtttttggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ccactggctgatgaaatgttttcatattttatcatcttcctgcagagaacagtttttggc 451
Query: 61 acgcagggtatttttatgaatgtcatgagtaaatattgtgggtcggtcacagagatgagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 acgcagggtatttttatgaatgtcatgagtaaatattgtgggtcggtcacagagatgagc 391
Query: 121 atgaacttgctagcctaggaaacctgagaatcgttaagcttcccccagcaaaaaagtggg 180
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 390 atgaacttgctagcctaggaaacctgagaatcgctaagcctcccccagcaaaaaagtggg 331
Query: 181 tatggaaagggagttattatttataatgggagtttgaaaacgctcatcag-actgtccca 239
|||||||||||||||||||||||||||||||||||||||||| ||||||| || ||| ||
Sbjct: 330 tatggaaagggagttattatttataatgggagtttgaaaacgatcatcagaac-gtcgca 272
Query: 240 gctgtgcatgcataacctagagttagcggactcgggtggatacacttgatgtcagctgca 299
||||||||| ||||||| || |||| | ||||||||||||||||||||||||||||||||
Sbjct: 271 gctgtgcattcataacccagtgttaacagactcgggtggatacacttgatgtcagctgca 212
Query: 300 tatctggatat 310
|||||||||||
Sbjct: 211 tatctggatat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
