TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAATCTTATTATCTATTAGAATGGCTACTCCGGCTTGTTTCTTCATA
CCATTTGCTTGGAAAATTGTTTTCCAGCCTTTCACTCTGAGGTAGTATCT
ATCTTTTTCTCTGAGATAAGTTTCCTGTAAGCAGCAAAATGTTGGGTCTT
GTTTGTGTAGCCAGTTTGTTAGTCTATGTCTTTTTATTGGGAAGTTGAGA
CCATTGATATTAAGAGATATTAAGGAAAAGTAATTGTTGGTTCCTGTTAT
TTTTGTTGTTAAAGTTGGCATTCTGTTCTTGTGGCTGTCTTCTTTTAGGT
TTGTTGAGGGATTACCTTCTTGTTTTTTTCTAGGGCCAGGTTCCCGTCCT
TGTATTGGTTTTTTTTCTGTTATTATCCTTTGAAGGGCTGGATTCGTGGA
AAGGTAATTTGTGAATTTGGTTTTATCGTGGAATATTTTGGTTTCTCCAT
CTATGGTAATTTAGAGTTTGGCTGGGTATAGTAGCCTTGGCTGGAATTTA
TGTTCTCTTAGTGTCTGTATAACATCTGTCCAGGCTCTTCTGGCTTTCAC
AGTCTCTGGTGAAAAATCTGGTGTAAATCTGATAGGCTTGCCTTTATATG
TTACTTGACCTTTCTCCCTTAGTGCTTTTAATATATGTTCTATCTTTATT
TAGTGCATTTGTTGTTCTGATTATTATGTGTCGA

TGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCACTGGAGTCTGTGTGTGTGTGTGTGTATC
TCTCTCTCTCTTATTCTCTTTCTGTTTGTGTGTAGACCACAGAGACTACT
ATGCCATATTATTAAGTGGATTTAAGAACCAGAAAACTGGAAATGTTGTT
TTTGTTTTTGTTTTTGTTTTTGTTGTTGTTGTTACTAAAGCAATTCAATG
GTGGCTTTACTTTGTAGTGGACTCAAACAGTTGCTTCAAGTAAACATTTT
TGTTAAAAATGACAATAATTTTCTTTATATTTGATCACCTTCATAATATA
TGAAATAGTGCTGAAGTAAAAAATTATGAGTCAGTTTTTAATGTGCTAAT
TGGGAAATAATAGTTAGAAAAGAAATACTTGATTTACTCTATATGACACT
GTTCTGCATACCTATATAAACTATGTCATGATACATGATACTATTGTCTG
GAAAGACCCAGAAAAGAGTCTCGGTTACAAAGATGATCACCAGAAAATGA
TGACAGCAACTACTCAGAGTGGCCAGGATCTCAAGCATATTCAACTTGTT
CTTACATATACATGCTTTTTAATTCATAGGAAGACTAAAGCAATCATTTT
ATAATTTTATAATTTCTTATTTGTAAATGAGGAAACTCAGAATCAGGCAG
GCTCTGAAGCTCCATTTCCTACAGGTAGCTTGCATA

Query= MSMg01no493_c12.g1 MSMg01no493_c12.g1 CHROMAT_FILE:
MSMg01no493_c12.g1 PHD_FILE: MSMg01no493_c12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:35 2005
         (666 letters)



>mm_chr3_10644633_10645696
          Length = 1064

 Score = 1210 bits (626), Expect = 0.0
 Identities = 653/666 (98%), Gaps = 8/666 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cactggagtctgtgtgtgtgtgtgtgtatctctctctctcttattctctttctgtttgtg 60
           |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||
Sbjct: 201 cactggagtctgtgtgtgtgtgtgt--atctctctctctcttattctctttctgtttgtg 258

                                                                       
Query: 61  tgtagaccacagagactactatgccatattattaagtggatttaagaaccagaaaactgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgtagaccacagagactactatgccatattattaagtggatttaagaaccagaaaactgg 318

                                                                       
Query: 121 aaatgttgtttttgtttttgtttttgtttttgttgttgttgttactaaagcaattcaatg 180
           ||||||||||||||||||||||||||||      ||||||||||||||||||||||||||
Sbjct: 319 aaatgttgtttttgtttttgtttttgtt------gttgttgttactaaagcaattcaatg 372

                                                                       
Query: 181 gtggctttactttgtagtggactcaaacagttgcttcaagtaaacatttttgttaaaaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gtggctttactttgtagtggactcaaacagttgcttcaagtaaacatttttgttaaaaat 432

                                                                       
Query: 241 gacaataattttctttatatttgatcaccttcataatatatgaaatagtgctgaagtaaa 300
           ||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gacaataaaatcctttatatttgatcaccttcataatatatgaaatagtgctgaagtaaa 492

                                                                       
Query: 301 aaattatgagtcagtttttaatgtgctaattgggaaataatagttagaaaagaaatactt 360
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 493 aaattatgagtcagtttttaatgtgctaattgggaaagaatagttagaaaagaaatactt 552

                                                                       
Query: 361 gatttactctatatgacactgttctgcatacctatataaactatgtcatgatacatgata 420
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gatttactctatgtgacactgttctgcatacctatataaactatgtcatgatacatgata 612

                                                                       
Query: 421 ctattgtctggaaagacccagaaaagagtctcggttacaaagatgatcaccagaaaatga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ctattgtctggaaagacccagaaaagagtctcggttacaaagatgatcaccagaaaatga 672

                                                                       
Query: 481 tgacagcaactactcagagtggccaggatctcaagcatattcaacttgttcttacatata 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tgacagcaactactcagagtggccaggatctcaagcatattcaacttgttcttacatata 732

                                                                       
Query: 541 catgctttttaattcataggaagactaaagcaatcattttataattttataatttcttat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 catgctttttaattcataggaagactaaagcaatcattttataattttataatttcttat 792

                                                                       
Query: 601 ttgtaaatgaggaaactcagaatcaggcaggctctgaagctccatttcctacaggtagct 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 ttgtaaatgaggaaactcagaatcaggcaggctctgaagctccatttcctacaggtagct 852

                 
Query: 661 tgcata 666
           ||||||
Sbjct: 853 tgcata 858


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1064
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1054
Effective search space:   691424
Effective search space used:   691424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)