Query= MSMg01no493_h24.b1 MSMg01no493_h24.b1 CHROMAT_FILE:
MSMg01no493_h24.b1 PHD_FILE: MSMg01no493_h24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:04 2005
(480 letters)
>mm_chr3_147487552_147488432
Length = 881
Score = 864 bits (447), Expect = 0.0
Identities = 470/478 (98%), Gaps = 1/478 (0%)
Strand = Plus / Plus
Query: 4 ggaattctctgaggcttcagacataaattaaagccatatagtgtcagcttcaataaaggt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctgaggcttcagacataaattaaagccatatagtgtcagcttcaataaaggt 263
Query: 64 ccctgttttttaaaatttttgactttcacttggaaagacaagactgtgctgggaggtggc 123
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 264 ccctgttttttaaaatttttgactttcacttggaaagacaagattgtgctgggaggtggc 323
Query: 124 tttttgatcgctctcaacatttttccggtcattctcaactccctttcaaaagaacctccc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttttgatcgctctcaacatttttccggtcattctcaactccctttcaaaagaacctccc 383
Query: 184 aacagaattacatgaataccatgcccccaaggtgaatgcactgtttggaacaacaaaata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aacagaattacatgaataccatgcccccaaggtgaatgcactgtttggaacaacaaaata 443
Query: 244 ttgatttcccattctgttgcttccatttaatttaaaccaaaaagcaagaaggagaaaggg 303
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 444 ttgatttcccattctgttgcttccatttaatttaaaccaaaacgcaagaaggagaaaggg 503
Query: 304 ttggtgagagtgtagtggtataatcccttccagtgatccttaaaaccttcacacattgcc 363
|||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 504 ttggtgagtgtgtagtggtataacccctttcagtgatccttaaaaccttcacacattgcc 563
Query: 364 agggttgaattttgttgacagatatttatttcaatcacattttctccttacatatctctc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agggttgaattttgttgacagatatttatttcaatcacattttctccttacatatctctc 623
Query: 424 caaagccgnctttt-cttctggtttcttttttatttattttattttattttttaaaag 480
|||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 624 caaagccgtctttttcttctgttttcttttttatttattttattttattttttaaaag 681
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 881
Length adjustment: 10
Effective length of query: 470
Effective length of database: 871
Effective search space: 409370
Effective search space used: 409370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_h24.g1 MSMg01no493_h24.g1 CHROMAT_FILE:
MSMg01no493_h24.g1 PHD_FILE: MSMg01no493_h24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:04 2005
(345 letters)
>mm_chr3_147653684_147654428
Length = 745
Score = 667 bits (345), Expect = 0.0
Identities = 345/345 (100%)
Strand = Plus / Minus
Query: 1 cttctcggcagggtagattttattgtgattagcccatgcaaaatttatagagccagatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 cttctcggcagggtagattttattgtgattagcccatgcaaaatttatagagccagatga 486
Query: 61 tctgtaaagagagacaaaataatattttttgtaagccgctgtcagaaacttttcccatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tctgtaaagagagacaaaataatattttttgtaagccgctgtcagaaacttttcccatgc 426
Query: 121 ctctgagaggtagaatcctcagtcgtggctctgtctggtggtctaagatgcagagggctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ctctgagaggtagaatcctcagtcgtggctctgtctggtggtctaagatgcagagggctg 366
Query: 181 tcagcccgggcgccggggaggacgatcgttgggggattttgctgctctttctatttgcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tcagcccgggcgccggggaggacgatcgttgggggattttgctgctctttctatttgcct 306
Query: 241 aatagggagccttatgctcagcatttcctaaagcaaaagagagatgaaatctctgggcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aatagggagccttatgctcagcatttcctaaagcaaaagagagatgaaatctctgggcac 246
Query: 301 ctcactgccgctgcctctcaaagatttcctgtcaaaacgagccta 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ctcactgccgctgcctctcaaagatttcctgtcaaaacgagccta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
