CGCTATACGACTCACTATTCCGAGAGGATCCGCGGAATTCTTTATTTACA
AGTCATGAATCATTAAAGGATTTATTTAGTATCTGGAGCATTGAAAAGGT
TTGGAATTCATTTTCAAAAGAGGTAAAGTAAACTACGATCTCCTGGGCTT
TGGCTTCCAGAACTCACATTCTCAGTGAATGATATTTTTCCCTCCCGGTG
TGCTACCTGATCGGGAGGTGTACAAAATAAGAGATGAAGCAAATTTCCCA
TGAGTATAATGTGAAATCACATCAGAGAATAATGTTGTATTTTTGTTTAA
AAACTAAATCAAATGCTTGTACATGAACTCCCACATAGGGTATGTTAAGA
TAACATGTGTTCTAGTATCAAGTTTTTCCCTGCATTTTCTACATGGCTTT
TGTCTTTAGTCACTACTTGCAGTCTAGAAGGAAGAATTAACTTCTAAGAT
TCATTTTTCATCCATGAAATAATGAGTATCCAGAAATCAGTAGCATATCA
TGTCCACTAATATTTTCAAGAAGTAAGTAGGCTGGAAATTGGCTGCTGCT
GTTGTGTATGTAAGGGGGCACCTCTAGGACAAGCTAGAGAGAGAGACCTG
GGATGGGGAACGCTTCAAGAAGTCTATAGGGTGAGACTCCTAGCAGTGGG
GTTATAGAACTGGAAGTGGCCACTTCCTGTAGCTAGGTAGGAGCACCAAT
GGATGAATAAGGACACCAATCACCCACAAAACTTTTGACCCAAAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXACTGGAATGCTTTAAATGGGGCCTAATGGGTCATCCTAGT
AGGAATATGGAAGACTTTGTTGCTGGGAGTAATTTGAACTGTGTTGACCG
GGCCTTCCTGAGATTTTAAGGGAGAAAAATTTCAGTATGTGGCATAAAGA
CTGTTTTTTGTGGTATTTTGGTAAAGAATGTGGCTGCTTTTTGCCCTTAT
CTGAAAAGTTTGCCTGAGGCTAAGGTGAAGAGACTTGGATTAATTGCATT
GACAAAGGAAGTTTCAAAAAAGCCCAGCAGAGACTTTGTTCTCTGGTTAA
ATCTCACAAAGAGAAGTTTGAACAAGCATAGCAAGCTTAGAAAGGCCAAA
TATAAAATATATGGTTCGAGTATTAAAGGCATACCAGGAAGTGAAATACA
GCAAAATCCTGTGTTCTAGGAAATAACAGATTAAAGGAGGGGGGCCTTGG
GGCAAGATCATACCCAACTTAATTTAGATCCAGGCATGGTGGTATACACC
TTTAATCCCATGAGACACGCATGCTGATCTCTGCATTCAAGGTCAATCTA
TAAGCAAGATCCAGGATAGCCAAGCTTGGGCAGTGAAGGAGTTAGAAAGG
AGTGGAGATCTGAAGACTGCTTTGACATCAGCCATGGAGATGCAGAGTTT
GGAGTTTGCCCAGTTGGTTTCCTGCCTTGCTTTGGAGAAACAGTT

Query= MSMg01no494_c19.b1 MSMg01no494_c19.b1 CHROMAT_FILE:
MSMg01no494_c19.b1 PHD_FILE: MSMg01no494_c19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:57 2005
         (706 letters)



>mm_chr3_48487876_48488982
          Length = 1107

 Score = 1328 bits (687), Expect = 0.0
 Identities = 699/705 (99%), Gaps = 5/705 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   ggaattcttt---atttacaagtcatgaatcattaaaggatttatttagtatctggagca 61
           ||||||||||   |  || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 ggaattctttagaa--tataagtcatgaatcattaaaggatttatttagtatctggagca 647

                                                                       
Query: 62  ttgaaaaggtttggaattcattttcaaaagaggtaaagtaaactacgatctcctgggctt 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ttgaaaaggtttggaattcattttcaaaagaggtaaagtaaactacgatctcctgggctt 587

                                                                       
Query: 122 tggcttccagaactcacattctcagtgaatgatatttttccctcccggtgtgctacctga 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tggcttccagaactcacattctcagtgaatgatatttttccctcccggtgtgctacctga 527

                                                                       
Query: 182 tcgggaggtgtacaaaataagagatgaagcaaatttcccatgagtataatgtgaaatcac 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tcgggaggtgtacaaaataagagatgaagcaaatttcccatgagtataatgtgaaatcac 467

                                                                       
Query: 242 atcagagaataatgttgtatttttgtttaaaaactaaatcaaatgcttgtacatgaactc 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 atcagagaataatgttgtatttttgtttaaaaactaaatcaaatgcttgtacatgaactc 407

                                                                       
Query: 302 ccacatagggtatgttaagataacatgtgttctagtatcaagtttttccctgcattttct 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ccacatagggtatgttaagataacatgtgttctagtatcaagtttttccctgcattttct 347

                                                                       
Query: 362 acatggcttttgtctttagtcactacttgcagtctagaaggaagaattaacttctaagat 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 acatggcttttgtctttagtcactacttgcagtctagaaggaagaattaacttctaagat 287

                                                                       
Query: 422 tcatttttcatccatgaaataatgagtatccagaaatcagtagcatatcatgtccactaa 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tcatttttcatccatgaaataatgagtatccagaaatcagtagcatatcatgtccactaa 227

                                                                       
Query: 482 tattttcaagaagtaagtaggctggaaattggctgctgctgttgtgtatgtaagggggca 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 tattttcaagaagtaagtaggctggaaattggctgctgctgttgtgtatgtaagggggca 167

                                                                       
Query: 542 cctctaggacaagctagagagagagacctgggatggggaacgcttcaagaagtctatagg 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 cctctaggacaagctagagagagagacctgggatggggaacgcttcaagaagtctatagg 107

                                                                       
Query: 602 gtgagactcctagcagtggggttatagaactggaagtggccacttcctgtagctaggtag 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 gtgagactcctagcagtggggttatagaactggaagtggccacttcctgtagctaggtag 47

                                                        
Query: 662 gagcaccaatggatgaataaggacaccaatcacccacaaaacttt 706
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46  gagcaccaatggatgaataaggacaccaatcacccacaaaacttt 2


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 706
Length of database: 1107
Length adjustment: 10
Effective length of query: 696
Effective length of database: 1097
Effective search space:   763512
Effective search space used:   763512
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)