Query= MSMg01no494_f23.b1 MSMg01no494_f23.b1 CHROMAT_FILE:
MSMg01no494_f23.b1 PHD_FILE: MSMg01no494_f23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:12 2005
(647 letters)
>mm_chr3_52465220_52466266
Length = 1047
Score = 1183 bits (612), Expect = 0.0
Identities = 639/650 (98%), Gaps = 4/650 (0%)
Strand = Plus / Minus
Query: 2 gaattcca----gagtctctgcgccctccgtctcttacctgataaccttctgaattagga 57
|||||||| ||||||| | ||||||||||||||||||||||||||||||||| |||
Sbjct: 931 gaattccagaccgagtctcggtgccctccgtctcttacctgataaccttctgaatccgga 872
Query: 58 atacgtccactctccctctccgccaatccgggaccaaagctgcttaggttccttatggtg 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 atacgtccactctccctctccgccaatccgggaccaaagctgcttaggttccttatggtg 812
Query: 118 gagaaaagcctcacatcaaaatagctagattggtcaaaatgatttgtttgttgctggttt 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 gagaaaagcctcacatcaaaatagctagattggtcaaaatgatttgtttgttgctggttt 752
Query: 178 gtttcgtgagatgggatttctctaggtagccccggatgtcctggaactcactctgcagac 237
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 gtttcgtgagacgggatttctctaggtagccccggatgtcctggaactcactctgcagac 692
Query: 238 taggctggccttgaactcagacccacctgttgtcccctcctcagtgctgggatcaaaggc 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 taggctggccttgaactcagacccacctgttgtcccctcctcagtgctgggatcaaaggc 632
Query: 298 ccacagcatccccacccaccctggtggtgaaaatgattttttaaaagcatgccagaaaat 357
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 631 ccacagcatccccacccaccctggtggtgaaaatgatttttaaaaagcatgccagaaaat 572
Query: 358 aaatgtcttttttaaaagaagaggtataaaggtattactaataagtttcttacattaaaa 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aaatgtcttttttaaaagaagaggtataaaggtattactaataagtttcttacattaaaa 512
Query: 418 ataagatgaaaagaaatgaaaagaacagaaaaaagagaagagactgagtctgctgccctc 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ataagatgaaaagaaatgaaaagaacagaaaaaagagaagagactgagtctgctgccctc 452
Query: 478 atgtctgcccatgctgctttgtaagcaaagaaatatgtgggcagctcttagaaagccagt 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 atgtctgcccatgctgctttgtaagcaaagaaatatgtgggcagctcttagaaagccagt 392
Query: 538 cagtgttcaggtgtccttgcgttgccgtctttggaagcttggctccttcagtctgctctg 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cagtgttcaggtgtccttgcgttgccgtctttggaagcttggctccttcagtctgctctg 332
Query: 598 tgacccccctataaggggacaaatagtaacttccagcttcttttttccag 647
|||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 331 tgacccccctataaggggacaaataggaacttccagcttcttttttccag 282
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_f23.g1 MSMg01no494_f23.g1 CHROMAT_FILE:
MSMg01no494_f23.g1 PHD_FILE: MSMg01no494_f23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:12 2005
(632 letters)
>mm_chr3_52278046_52279077
Length = 1032
Score = 1174 bits (607), Expect = 0.0
Identities = 627/635 (98%), Gaps = 3/635 (0%)
Strand = Plus / Plus
Query: 1 actatgtagaccaggctgtcttcagactcatagagacctgcctgcctctgagtgctagga 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 198 actatgtagaccaggctgtcttcagactcatagagacctgcctgcctttgagtgctagga 257
Query: 61 ttaaaagcatatgccactgtgactggctagttaaatattctaaaggtggaacatatttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ttaaaagcatatgccactgtgactggctagttaaatattctaaaggtggaacatatttat 317
Query: 121 attttttgtctctctaggtgttgtcttatagtcatggagtctgattgtattgctttatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 attttttgtctctctaggtgttgtcttatagtcatggagtctgattgtattgctttatat 377
Query: 181 gaatgtaatgtctcctctttgatcgacactcctcagagttggatctttgaatttgcttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gaatgtaatgtctcctctttgatcgacactcctcagagttggatctttgaatttgcttct 437
Query: 241 actttgcatggtctggagaatgatcgacagtaattgtactttttgaaaaaagatttattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 actttgcatggtctggagaatgatcgacagtaattgtactttttgaaaaaagatttattt 497
Query: 301 atttttgcgtatgtcgttgtcttcagacacacaagaagaggacatctgatcccattacag 360
|||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 498 atttttgcatatgtcgttgtcttcagacacacaagaagaggacatctgatctcattacag 557
Query: 361 atggttgtgaggcaccatgtggttgctgggaattgaactcaggacctctggaagagcatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 atggttgtgaggcaccatgtggttgctgggaattgaactcaggacctctggaagagcatt 617
Query: 421 cagtgttcgtaatggctgatccatc---tctcctgcccctgtacttttggttttgaatga 477
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 618 cagtgttcgtaatggctgatccatcatctctcctgcccctgtacttttggttttgaatga 677
Query: 478 gttattatcaaatagaagtgagtgaacaaacgtgagtgagaaatacaaagaagcatcgaa 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gttattatcaaatagaagtgagtgaacaaacgtgagtgagaaatacaaagaagcatcgaa 737
Query: 538 ctagcaactccagggttttgaacgcccagcccagatgacataatcaaatgaaagattaga 597
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 738 ctagcaactccagggttttgaacgcccagcccagatgacgtaatcaaatgaaagactaga 797
Query: 598 caaaggtaccaaagccagcagcttacagtcatcca 632
|||||||||||||||||||||||||||||||||||
Sbjct: 798 caaaggtaccaaagccagcagcttacagtcatcca 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
