GCGCXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGTTTAT
CTCTGTACCCCATTTTTAAAATGGGGTTATTTGAATTTCTGGTGTTCAGC
TTCTTGAGCTCTTTTTGTATATTTGATATTAGTCCCCTATCAGATTTATG
AATGGTAAAAATTCTTTCCCAATCTGTTGGAGGCCTTTTTGTCTTATTGA
CAGTATCTTTTGCCCTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTG
TCAATTCTTGATTTTAGAGCATAGGCCATTGCTGTTCTGTTAAGAAATAT
TTTCCCTGTACCCATATCTTCGAGGGTTTTCCCCACTTTCTCCTCTATAA
TTTTCAGTGTCTATGGTTTTATGTGGAGTTCTTTGATCCACTGAGACTTG
AGCTTTGTACAAGGAAATAAGAATAGATCAATTATCATTCTTCGGCATAA
CTAGCAGTTTTGCCAGCACCATTTGTTGAAAATGCTGTTCCCACCCCTTC
CCCCACTGGATGGTTTTAGCTTCCTTGTCAAAGATCAAGTGACCATAGGT
GTGTGGGTTCATTTCTGGGTCTTCAATTCTAATCCATTGATGTACATGTC
TGTTGCTGTACCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTAC
AGCTTGAGGTCAGGCATGGTGATTCCCCCAGAGGTTCTTTATTGTTGAGA
ATAGGTTTTGCTATCATAGGATTTTTGTTATTCCAGATGAATT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXTAAAATGATATCAGCACCATAGGGACATATTAATTGAGAA
ATGAATTGCACAAAAAAAGGAAAAAAAAAACCAAGAGTTTAACTTAACTT
ACTAAGAAATACACAGAACATTTTAAATGATTAAAAAACAAGTTGTTAAA
AGTATGAATTATAGCTTATCATCTATTGCATGTTTTTCAAAAATATAATT
GTATAGAATCAATAATAAACCCATGTTTGTCTTTCAAATAAGATTAAGAT
GTCGTAGGTATACATAAAGCATGGCACCATGGCATTTGGCAACGGGAAGC
CAACTGTGTGTTAAACTTCTCTACTCCATCAAAATTTCAAGTCTCCACCA
TGGATTTAGTTAACCTTCAATAATGGTGGCTTTTTGATTCATTTTCTCTC
ATCTTTTACCATCACTTCCCAGAACCCTACTTCGGGAAAATTATTACATT
AAAGGAGAGTGGATATGACATCGTTGATGAAATGCAATTAAAAAATTAAT
TCCAATTGCCCTGTCATCAAGTATCATTGAATAGATTGAATGCAAATAGA
TGGAGCTCTATAAGCAGACAACTGAAATGTGTTTCTATTTTTAGTTTAGT
TCTGGGATTGTGTAGGCTGCTAAAGAGTTCTTGGTTCTGTTTGGNTATAT
TTAGTTATTTCATTTATGCCTTACAAAGTATAACAAACAAGCTC

Query= MSMg01no494_m17.g1 MSMg01no494_m17.g1 CHROMAT_FILE:
MSMg01no494_m17.g1 PHD_FILE: MSMg01no494_m17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:43 2005
         (617 letters)



>mm_chr3_117913324_117914340
          Length = 1017

 Score = 1050 bits (543), Expect = 0.0
 Identities = 600/619 (96%), Gaps = 4/619 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   taaaatgatatcagcaccatagggacatattaattgagaaatgaattgcacaaaaaaa-g 59
           |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 201 taaaatgatatcagcaccatagggacatgttaattgagaaatgaattgcacaaaaaaagg 260

                                                                       
Query: 60  gaaaaaaaaaaccaagagtttaacttaacttactaagaaatacacagaacattttaaatg 119
           |||||||| || || ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 gaaaaaaacaa-caggagtttaacttaacttactaagaaatacacagaacatcttaaatg 319

                                                                       
Query: 120 attaaaaaacaagttgttaaaagtatgaattatagctt-atcatctattgcatgtttttc 178
           |||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 320 attaaaaaacaagttgttaaaagtatgaattacagcttaat-atctattgcatgtttttc 378

                                                                       
Query: 179 aaaaatataattgtatagaatcaataataaacccatgtttgtctttcaaataagattaag 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aaaaatataattgtatagaatcaataataaacccatgtttgtctttcaaataagattaag 438

                                                                       
Query: 239 atgtcgtaggtatacataaagcatggcaccatggcatttggcaacgggaagccaactgtg 298
           ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 439 atgtcgtaggtatacataaagcatgacaccatggcatttggcaaagggaagccaactgtg 498

                                                                       
Query: 299 tgttaaacttctctactccatcaaaatttcaagtctccaccatggatttagttaaccttc 358
           ||| |||||||| |||||||||||  |||  |||||||||||||||||||||||||||||
Sbjct: 499 tgtgaaacttctttactccatcaaggttttgagtctccaccatggatttagttaaccttc 558

                                                                       
Query: 359 aataatggtggctttttgattcattttctctcatcttttaccatcacttcccagaaccct 418
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 559 aataatggtggctttttgattcatttcctctcatcttttaccatcacttcccagaaccct 618

                                                                       
Query: 419 acttcgggaaaattattacattaaaggagagtggatatgacatcgttgatgaaatgcaat 478
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 actttgggaaaattattacattaaaggagagtggatatgacatcgttgatgaaatgcaat 678

                                                                       
Query: 479 taaaaaattaattccaattgccctgtcatcaagtatcattgaatagattgaatgcaaata 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 taaaaaattaattccaattgccctgtcatcaagtatcattgaatagattgaatgcaaata 738

                                                                       
Query: 539 gatggagctctataagcagacaactgaaatgtgtttctatttttagtttagttctgggat 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gatggagctctataagcagacaactgaaatgtgtttctatttttagtttagttctgggat 798

                              
Query: 599 tgtgtaggctgctaaagag 617
           |||||||||||||||||||
Sbjct: 799 tgtgtaggctgctaaagag 817


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space:   611249
Effective search space used:   611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)