Query= MSMg01no494_o10.b1 MSMg01no494_o10.b1 CHROMAT_FILE:
MSMg01no494_o10.b1 PHD_FILE: MSMg01no494_o10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:51 2005
(552 letters)
>mm_chr3_32490519_32491470
Length = 952
Score = 973 bits (503), Expect = 0.0
Identities = 538/551 (97%), Gaps = 4/551 (0%)
Strand = Plus / Plus
Query: 4 ggaattcacttatgcagaccatgctgaactcaacgagatctgcctgcctttgcctactga 63
|||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 204 ggaattcacttacgtagaccatgctgaactcaacaagatctgcctgcctttgcctactaa 263
Query: 64 attagatgtaaagtacgaatccgtatcttagcacattaatgtttaatgttcaaaagagga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 attagatgtaaagtacgaatccgtatcttagcacattaatgtttaatgttcaaaagagga 323
Query: 124 gtctcctacacctgaacactgaaccataaaaaggaatggacagagaagtatcagagacaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtctcctacacctgaacactgaaccataaaaaggaatggacagagaagtatcagagacaa 383
Query: 184 tcggaagggggcttgtgtgtgtgcccttgtagtaacgggcacacatgccaggatctcaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcggaagggggcttgtgtgtgtgcccttgtagtaacgggcacacatgccaggatctcaaa 443
Query: 244 gagggaacacaatggtgtcatcaaacctataagcaggaggagcaggacaacagaaggtgt 303
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 444 gagggaacacaatggtgtcatcaaacctagaagcaggaggagcaggacaacagaaggtgt 503
Query: 304 tcgatttatcaaggatgcccccatccagagtgtccacccatcctgtgatactaccatgct 363
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttgatttatcaaggatgcccccatccagagtgtccacccatcctgtgatactaccatgct 563
Query: 364 tcctcttgacctaaagtgatatcataacgtatatttgtttttttttt--ttgtttgtttg 421
||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 564 tcctcttgacctaaagtgatatcataaagtatatttgttttttttttgtttgtttgtttg 623
Query: 422 ttttaggaaaatggatttgaacgagactagcataataccaattaggatacaaaacctgtt 481
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 624 ttttaggaaaatggatttgaatgagactagcgtaataccaattaggatacaaaacctgtt 683
Query: 482 acatcacaaacgtagttacttttcaagtctcaatcaggctgagtgtgcagctcgtgcaca 541
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 acatcaca--cgtagttacttttcaagtctcaatcaggctgagtgtgcagctcgtgcaca 741
Query: 542 ggccaggtcct 552
|||||||||||
Sbjct: 742 ggccaggtcct 752
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space: 510564
Effective search space used: 510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_o10.g1 MSMg01no494_o10.g1 CHROMAT_FILE:
MSMg01no494_o10.g1 PHD_FILE: MSMg01no494_o10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:51 2005
(397 letters)
>mm_chr3_32637947_32638743
Length = 797
Score = 719 bits (372), Expect = 0.0
Identities = 381/384 (99%)
Strand = Plus / Minus
Query: 14 gttaagtccacttccttgcatctgtccgtctttcatcacttatcaatgacaaactgcaaa 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 gttaagtccacttccttgcatctgtccgtctttcatcacttatcaatgacaaactgcaaa 738
Query: 74 tgattctaaaaagggctagtgaggtggcctgggaaggaagtgcatttgtttcaaggcttg 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tgattctaaaaagggctagtgaggtggcctgggaaggaagtgcatttgtttcaaggcttg 678
Query: 134 ataacctgaatttgatccccagatcccacagtggaaggagagctgattcccacaagctgt 193
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 677 ataacctgaatttgatccccagatcccacagtggaagaagagctgattcccacaagatgt 618
Query: 194 cttctgacctctacatgcacaggcactttagttgtgtcaaggccccttctccaccccaac 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 cttctgacctctacatgcacaggcactttagttgtgtcaaggccccttctccaccccaac 558
Query: 254 taagccatgatcaccatcttctccttctctcaacacctagttctcccaaaagccctatat 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 taagccatgatcaccatcttctccttctctcaacacctagttctcccaaaagccctatat 498
Query: 314 ccagggagacctggaagcccacacactactgccattttcccatgttaagatgattgccat 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ccagggagacctggaagcccacacactactgccattttcccatgttaagatgattgccat 438
Query: 374 attcattttatatttacactcctc 397
|||||||||||||||| |||||||
Sbjct: 437 attcattttatatttatactcctc 414
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 797
Length adjustment: 9
Effective length of query: 388
Effective length of database: 788
Effective search space: 305744
Effective search space used: 305744
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
