Query= MSMg01no495_g15.b1 MSMg01no495_g15.b1 CHROMAT_FILE:
MSMg01no495_g15.b1 PHD_FILE: MSMg01no495_g15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:29 2005
(619 letters)
>mm_chr3_145047795_145048813
Length = 1019
Score = 1143 bits (591), Expect = 0.0
Identities = 609/615 (99%)
Strand = Plus / Plus
Query: 5 gaattcatctcttctcgttttggatttcaaagctactcagaggatgagtacagtccaaat 64
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatctctactagttttggatttcaaagctactcagaggatgagtacagtccaaat 264
Query: 65 catactgtgctctgtgtatttgaagtacaagaacaagtaccacctacaagaatcaaatat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catactgtgctctgtgtatttgaagtacaagaacaagtaccacctacaagaatcaaatat 324
Query: 125 tttcagtgaccttaggtagcataaatatcatctataacaatttataagatttaaagctac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttcagtgaccttaggtagcataaatatcatctataacaatttataagatttaaagctac 384
Query: 185 catgaaaaaaatatcaaatttccaaatgatccaaaacacagactgtgttttcaagctagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 catgaaaaaaatatcaaatttccaaatgatccaaaacacagactgtgttttcaagctagt 444
Query: 245 attataatcaaatatgctccttacctattagataatcaaaatctaaagtctgttgattta 304
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 445 attataatcaaatatgctccttacctaaaagataatcaaaatctaaagtctgttgattta 504
Query: 305 cccaaggactaattcagtgagtgaattctgacttttttctaaagatgttcacatcatcac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cccaaggactaattcagtgagtgaattctgacttttttctaaagatgttcacatcatcac 564
Query: 365 acacagttcccttccacagaaaatagttatctaatatgcctacattggctacttttcctg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acacagttcccttccacagaaaatagttatctaatatgcctacattggctacttttcctg 624
Query: 425 ttactatgataaaaaatactctgagaaaagcaacttaagggagaaaggattatttgggct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttactatgataaaaaatactctgagaaaagcaacttaagggagaaaggattatttgggct 684
Query: 485 cccagttcaaggatacagtccatcatggcagagaagcccttgcagcagaagatgatggcc 544
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 685 cccagttcaaggatacagtccatcatggcagaggagccctagcagcagaagatgatggcc 744
Query: 545 acattgcatcttcagaggcagaaaatccttgtgcttagctagcttcctcctctttctgca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 acattgcatcttcagaggcagaaaatccttgtgcttagctagcttcctcctctttctgca 804
Query: 605 agcctatggaatggt 619
|||||||||||||||
Sbjct: 805 agcctatggaatggt 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no495_g15.g1 MSMg01no495_g15.g1 CHROMAT_FILE:
MSMg01no495_g15.g1 PHD_FILE: MSMg01no495_g15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:29 2005
(674 letters)
>mm_chr3_145112779_145113855
Length = 1077
Score = 1071 bits (554), Expect = 0.0
Identities = 609/628 (96%), Gaps = 9/628 (1%)
Strand = Plus / Minus
Query: 1 ttttctcctctccactcctttcttgcctgcttatcagacttgggctgcatcttatttgga 60
||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 625 ttttctcttctccactcctttcttgcctgcttatcagactttggctgcatcttatttgga 566
Query: 61 tcttggctctcaactccttcatctatgtggtttgaat-atatttataatttgatcactg- 118
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 565 tcttggctctcaactccttcatctatgtggtttg-ataatatttataatttgatcactgt 507
Query: 119 -tcccctc-cccccagt-cataagataactgtacaattcctttgggataggggccataga 175
||||| | |||||||| | |||||||||||||||| |||||||||||||||||||||||
Sbjct: 506 ttcccc-cacccccagtccttaagataactgtacaaatcctttgggataggggccataga 448
Query: 176 gctgtgtgtgtgtggtcagtatgcccctttctggtcttgtgttgtacctgctttctgtcc 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gctgtgtgtgtgtggtcagtatgcccctttctggtcttgtgttgtacctgctttctgtcc 388
Query: 236 aactctcttagtcatgttgcctgtcctctggttctggaagaaaatcccctcatcttggct 295
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aactctcttagccatgttgcctgtcctctggttctggaagaaaatcccctcatcttggct 328
Query: 296 caaacactataactttcctgtcagatcacagagttctgctcatggaagctttcttgagct 355
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 caaacactgtaactttcctgtcagatcacagagttctgctcatggaagctttcttgagct 268
Query: 356 gctagaccatgacagcttatttatcatagatcctctaagtctgaattcctattagtcttt 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 267 gctagaccatgacagcttatttatcatagatcctctaagtctgaattcctattagtattt 208
Query: 416 tttatctgttctgcacttatggatttaatcaaatacagaaataaaagaaagaaacaatct 475
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 207 tttatctgttctgcacttatggatttaatcaaatacagaaaaaaaagaaagaaacaatct 148
Query: 476 ttgaaaatgtttacatcaaacacgtacagacttttttcttcttcacaaatgttccttaaa 535
|||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 147 ttgaaaatgtctacatcaaacacgtacagacttttt-cttcttcacaaatgttccttaaa 89
Query: 536 caatatactatagcagttatttacatagatttatattttattaaatattataaatagccc 595
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 caatatactatagcaattatttacatagatttatattttattaaatattataaatagccc 29
Query: 596 agagatgacttaa-gtacacaggaagaa 622
||||||||||||| ||||||||||||||
Sbjct: 28 agagatgacttaaagtacacaggaagaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1077
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1067
Effective search space: 708488
Effective search space used: 708488
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
