CCCATATTTNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXCGCGGAATTCTTCAGAATTGCCGAAATTTTCTAGTTTCTCAGTG
GTCTGAATGTAAGCAACTATGATTCTAGAAGACCAATAATCATCAAAAAT
ACCTACCTGAACTAATGACTTCCAACTTCTCGTTTCATACTTGAGAAGAA
TAATGAATAAGCAGATTGAGTACAGTTTCTTGTCTTATGAAATGTCAGAA
AGACTCTTATAGAATCCAGGAATTCTTAAAGGAATACCACTGTACTGCAT
AGTTTAGAGCCTTTTAAGAGAAGCTTATGTTTAAGCAAATGTGTCTCAGA
TGGGGTTATCCTTGTTGTGAGGAAACACAATGACTAAAGGTAAATTCAAG
TGGGAGGGTTTATTTGCTTTATACTTCCACATCAAAATTCATGACTGAAG
GTAGTCAGGGCAGGAAACAAGAAAAAAAAAAAACTGTAGGCACGGGAAGT
GTTGCTTACTAGCTTGTTTCCCATAGCTTGATCAGCCTGTTTTCTTATAG
TACTTAAAACTACTCTCACTGGAGAAGTGCTAGACACAAAGGACTGGACC
CTCCTACATAATCAATAAATAAGAAACTGCCTTGCATACAATTGTCCTAT
GGAGACGATTGCCAGAAAATTTTAAGACAATTTTTCTGTTGTGGCTTCCT
CCTAACTGN

GTTCTATGCTGTGGGCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGATGAATACAGAATGGCT
GACAAGCACCTGAAAAAATGTTTAACATCCTTATTCATTAGAGAAATGCA
AATCAAAACAAACCTGAGATTCCATCTCACACCAATCAGAATGGCTAAGA
TCAAAAATTCAGTTGACAGCAGATGCTATCAAGGATGTGGAGAAAGAGGA
ACAGTCCTTCATTGTTGGTGGGTATACAAGCTTGTACTATCACTCTGATA
ATTAGTCTGGCGGTTCCTCATATTATTGGAAATAGTACTATTGGAGGATC
CCCCAATACCTCTCCTGGGTATATATTCAGAAGATGTTCCTTTCTGTTAT
AAGATCACAAGCTCCATTATGCCCATAGTTTTCTTATTCACAAATTTCCT
AATTCTAGAAATAATCCCAGATGCCCCTAATCTGAGGTAAGGATTCACAA
AATGTGGCACATACTCTTCATGGTTCTATTACTCCCTTTCTCAATTTAAT
GAATTTTTTAATTCCTTTGCCAATGGCTTTGTTTCGCCATGGCATCTCCT
TTTACTTTTGGTACAATTTTCCCCTATTTTATCCCTCTTGTACATTGTAC
ATCCGTGATTATGTGGGACATTATGCCCCATTACACTTTTGCCTTTTTTG
AGTATTTTTACAATTCCGTTTTTGCCATAATCCCCGTACACTTTTCCGCA
CCCCTATTATCCTTTCCG

Query= MSMg01no495_i13.b1 MSMg01no495_i13.b1 CHROMAT_FILE:
MSMg01no495_i13.b1 PHD_FILE: MSMg01no495_i13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:37 2005
         (594 letters)



>mm_chr3_77571165_77572158
          Length = 994

 Score =  743 bits (384), Expect = 0.0
 Identities = 426/442 (96%), Gaps = 7/442 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttctagtttctcagtggtctgaatgtaagcaactatgattctagaagaccaataatcatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttctagtttctcagtggtctgaatgtaagcaactatgattctagaagaccaataatcatc 378

                                                                       
Query: 61  aaaaatacctacctgaactaatgacttccaacttctcgtttcatacttgagaagaataat 120
           |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aaaggtacctacctgaactaatgacttccaacttctcgtttcatacttgagaagaataat 318

                                                                       
Query: 121 gaataagcagattgagtacagtttcttgtcttatgaaatgtcagaaagactcttatagaa 180
           || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 317 gagtaagcagattgagtacagtttcttgtcttatgaaatgtcagaaagactcttagagaa 258

                                                                       
Query: 181 tccaggaattcttaaaggaataccactgtactgcatagtttagagccttttaagagaagc 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 257 tccaggaattcttaaaggaataccactgtactgcatagtttagagccttttaagaga--- 201

                                                                       
Query: 241 tt-atgtttaagcaaatgtgtctcagatggggttatccttgttgtgaggaaacacaatga 299
           ||  ||   |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ttcctg--gaagcaaatgtgtctcagatggggttatccttgttgtgaggaaacacaatga 143

                                                                       
Query: 300 ctaaaggtaaattcaagtgggagggtttatttgctttatacttccacatcaaaattcatg 359
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 142 ctaaaggtaaattctagtgggagggtttatttgctttatacttccacatcaaaattcatc 83

                                                                       
Query: 360 actgaaggtagtcagggcaggaaacaag-aaaaaaaaaaaactgtaggcacgggaagtgt 418
           |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 82  actgaaggtagtcagggcaggaaacaagaaaaaaaaaaaaactgcaggcacgggaagtgt 23

                                 
Query: 419 tgcttactagcttgtttcccat 440
           ||||||||||||||||||||||
Sbjct: 22  tgcttactagcttgtttcccat 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space:   574656
Effective search space used:   574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)