CTTCTCTTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGNAA
ATCCGCGGAATTCCATGGTTTGACCATTATCTACTTGACCACTCCATACC
AGTTCCTCTTGTGGAACAGTCATGTGCTCTATGGGTAGAGGGTTCTGTAA
TTGGATGATGACCATAACAATAGGGGGAGGGGTAGCAACAGAGTGGGTTT
GTGTGTCCCAGACTTGGGGGTCAATCTGGAAGGCTGACAAAGGACATGTT
TGAACAAATAGGTTGTTTAGCTAGGAGAAAGGGGAGAGAAACTGCTGGTA
AGCTTGAAGTCAGGTGAATGGGATATTGTAGGAAATAGAGGCTCCCATTT
TGGCTAGAAGATCCGTTTCCAATAAGGAGATGGATGGGACAGGTTGGTAC
CACCAGAAAAGAATGGGTGAGAGAAACACCCCTGAAAATGCAACTAAATG
GTGGGGTCTGGCAAGGTTGGTAAGGCTGTCTTCCTACCCTGAAAATAGGG
AAACAAGGAGAGGTAGGCCCCCTAGACTCCATCAGCACCATAACTGATCC
CAGTGTCTAGGAGGAAGGAGATGGGTCATCCTGAAACCATTGTGACTACC
ATGAATTGTGTCAGAGATGACAGGGATCAAGGCACCTAGGCCCCTTCAGT
CATCCATGGCCAAGCCTAAGAAGTCAGCTGGAGGATGATCTGGGTCTGAT
GACCCCACACGGTGAGACAGTCAACA

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTAGACATGAGTTACCATATTCTTACA
TGGTAAAATCTTTCCTATGGGCTCCATTTCTGTTAAGTTCACTCACATAA
CCTATATGTTCCATGCATATACAAACAATACCTGTACTAACAGCAACATT
AAAAATCATGTGAGATGGGTGTGGCACCTTCTTTTCTTTACTTCTAGCCT
CTGCCCTGTTGAGTGGTGTGTGGCATAATCTATGTAGAATTCTTTAAATT
TGTGGGGAAGCAGGGAATGTTTCTTGGAGTAATTTCTTCCCTAGTCCTTC
CACAAGAAAATCACTTTTCTTTCTAGAATGGTGAGCTATCTAAAACATAA
AATATAACTTCACAAGAATGGCTTGTGCTCTCTCTTTCTCTCTCTCTCTC
TCTTTCACACACACAAACACACACACACACACACACACACACATACACAG
AGGCAGCGTGGCTATATACTTGTGAACTTGCTCTATGCTGTGGTCAGCCA
CTGTCTCCCACACTTAGGACCTGTGCAATGTGTGCCTTCCTGAGATTCAG
TGGGAATCAAATGTAAGCTCTTTGGAAAATCTGCAGTAAAGACCATGTCA
TCTGGCAAGAAAGCACACATGATGCAGGGTTCTTCAAATCTGTGGCATAA
TCAGAATGTGCCCAACTCCTTAAAGCTTGACTTTGCGAACAAGCCCCACA
TCTAC

Query= MSMg01no495_n21.g1 MSMg01no495_n21.g1 CHROMAT_FILE:
MSMg01no495_n21.g1 PHD_FILE: MSMg01no495_n21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:01 2005
         (416 letters)



>mm_chr3_38385974_38386789
          Length = 816

 Score =  766 bits (396), Expect = 0.0
 Identities = 411/416 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tagacatgagttaccatattcttacatggtaaaatctttcctatgggctccatttctgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tagacatgagttaccatattcttacatggtaaaatctttcctatgggctccatttctgtt 494

                                                                       
Query: 61  aagttcactcacataacctatatgttccatgcatatacaaacaatacctgtactaacagc 120
           |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 493 aagttcactcgcataacctatatgttccatgcatatgcaaacaatacctgtactaacagc 434

                                                                       
Query: 121 aacattaaaaatcatgtgagatgggtgtggcaccttcttttctttacttctagcctctgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aacattaaaaatcatgtgagatgggtgtggcaccttcttttctttacttctagcctctgc 374

                                                                       
Query: 181 cctgttgagtggtgtgtggcataatctatgtagaattctttaaatttgtggggaagcagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cctgttgagtggtgtgtggcataatctatgtagaattctttaaatttgtggggaagcagg 314

                                                                       
Query: 241 gaatgtttcttggagtaatttcttccctagtccttccacaagaaaatcacttttctttct 300
           |||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gaatgccacttggagtaatttcttccctagtccttccacaagaaaatcacttttctttct 254

                                                                       
Query: 301 agaatggtgagctatctaaaacataaaatataacttcacaagaatggcttgtgctctctc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 agaatggtgagctatctaaaacataaaatataacttcacaagaatggcttgtgctctctc 194

                                                                   
Query: 361 tttctctctctctctctctttcacacacacaaacacacacacacacacacacacac 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tttctctctctctctctctttcacacacacaaacacacacacacacacacacacac 138


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space:   328449
Effective search space used:   328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)