Query= MSMg01no497_c12.b1 MSMg01no497_c12.b1 CHROMAT_FILE:
MSMg01no497_c12.b1 PHD_FILE: MSMg01no497_c12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:44 2005
(623 letters)
>mm_chr3_70203136_70204161
Length = 1026
Score = 1106 bits (572), Expect = 0.0
Identities = 612/630 (97%), Gaps = 11/630 (1%)
Strand = Plus / Plus
Query: 1 tgggcatctttatgaacttatttttctgcatacacagtcatttataattagccattcatt 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggcatctttaggaacttatttttctgcatacacagtcatttataattagccattcatt 260
Query: 61 gtttgggtgcaaacgctgctgttaaagtggtgattgaaccagtgctctcatttactcttc 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 gtttgggtgcaaacgctgctgttaaagtggtgattgaaccagtgttctcatttactcttc 320
Query: 121 agcagaagcactgtttacactattgattagctaacgaatctattttatattataatggtg 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 agcagaagcactgtttacactattgatttgctaacgaatctattttatattataatggtg 380
Query: 181 tgggtgcaaagcctgcccagtgcttctaaaatacagtaaatccttagagttcttaaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggtgcaaagcctgcccagtgcttctaaaatacagtaaatccttagagttcttaaagat 440
Query: 241 gaca---tattttcccc-tcgttattcactttgctttcattaagcagagagatttgtaga 296
|||| | |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacacacaa----ccccttcgttattcactttgctttcattaagcagagagatttgtaga 496
Query: 297 atatagcagtcacccttgtaatatgttgaagctgtgatttaaatttaacttcatgaggta 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 atatagcagtcacccttgtaatatgttgaagctgtgatttaaatttaacttcatgaggta 556
Query: 357 tctctcggagatgttcacacttttaatgatatctggcaagcctctaatgaaagtttttca 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tctctcggagatgttcacacttttaatgatatctggcaagcctctaatgaaagtttttca 616
Query: 417 aagtaataagatggaaaagaagcactgggatatgctcacgttggaaactgaaatcatttt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aagtaataagatggaaaagaagcactgggatatgctcacgttggaaactgaaatcatttt 676
Query: 477 ggctaaatgcatcagattagagattgccccagttactgattgcagctattaggtagtccc 536
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 677 ggctaaatgcatcagattagagattgccccagtcactgattgcagctattaggtagtccc 736
Query: 537 ctcatataggagagccagctattgatttttgaatttgaatttctttcgaaataattgatt 596
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ctcatgtaggagagccagctattgatttttgaatttgaatttctttcgaaataattgatt 796
Query: 597 tttt---ctgttgggatccttatctcagct 623
|||| |||||| ||||||||||||||||
Sbjct: 797 tttttttctgttgtgatccttatctcagct 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1026
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1016
Effective search space: 622808
Effective search space used: 622808
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_c12.g1 MSMg01no497_c12.g1 CHROMAT_FILE:
MSMg01no497_c12.g1 PHD_FILE: MSMg01no497_c12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:44 2005
(667 letters)
>mm_chr3_70372986_70374048
Length = 1063
Score = 832 bits (430), Expect = 0.0
Identities = 445/452 (98%), Gaps = 4/452 (0%)
Strand = Plus / Minus
Query: 1 actttgtgtttgattttttttttcttctaggatttcaataggactgtagtccttactcat 60
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 448 actttgtgtttgattttttt----ttctaggatttcaataggactgtagtccttactcat 393
Query: 61 atccctaataactgtgaaactcattttcttcaggacaactactagcttagttcaggtccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 atccctaataactgtgaaactcattttcttcaggacaactactagcttagttcaggtccc 333
Query: 121 tttcgtctactaagctaactaatagtttcactaaaatttatgaaattctattaggtaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tttcgtctactaagctaactaatagtttcactaaaatttatgaaattctattaggtaatt 273
Query: 181 gaacaaagatatttttagcccagatggcacaaaatctgagctagtagcttcagtggagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gaacaaagatatttttagcccagatggcacaaaatctgagctagtagcttcagtggagac 213
Query: 241 tattgtactgtttatcaaggaatcagatgagctggagagagatgagtttagaggtcccaa 300
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 tagagtactgtttatcaaggaatcagatgagctggagagagatgagtttagaggtcccaa 153
Query: 301 agtgtctgattgaacacagcaaaaatgaaagtgataatcaagccatactcagtgccatag 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 agtgactgattgaacacagcaaaaatgaaagtgataatcaagccatactcagtgccatag 93
Query: 361 ttcaaacaagaggctaatctggagtgagcaaggaatcttttgttcggccccccatgagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 ttcaaacaagaggctaatctggagtgagcaaggaatcttttgttcggccccccatgagat 33
Query: 421 ggtacatttaatcagcatgcacagggcagagc 452
||||||||||||||||||||||||||||||||
Sbjct: 32 ggtacatttaatcagcatgcacagggcagagc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1063
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1053
Effective search space: 691821
Effective search space used: 691821
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
