CGACTCACATAGTGCAAAATCCGCGGAATCCATACAATAACANAGAAAGA
CACGAGTATGATAGACAACAAAGAGAAAGGATACTTCACAGCTTACACTG
GACCAATGTGACCTTGAGTCTAAACCAGAAAGGGAGCCCAAGAAAACAGG
ACGACACATGAATAACTCTTTTGAGTACAAATGCAAAATCCTTACTGAAA
TACTAACAAATCAAACCCAACAGTGTTTTAGACAGAAAATACATCATGAT
CAAGTGGAGCAGATACACAAATGGTACACGGACTAGCATCTATTATAACA
TGAACATAAGGAATCACTTTAACAGAATAGGGAATCAAATGACATGGAGT
TCTTCCGTAAGACGGTGTATGTTGTCTGGGATCTACAGCATGCTTGGGAT
TTGTAACGATCAATCTATTTGGTTGCCAAGTAGTTAGAGCAAGAGTATTT
TAAATACTTGTAGACCTAATTGTAAACGATTAGAAGATGATTGCCAGACC
TTCTCTAAGATATGGATCTCACAGTGGCCCCTGCAGCAGCCACCCATGTA
GGGCTCCTGTGAATGATGGTCTCTTTCACTTGCTAAACCAGACACTGGTT
GCAGGCTTCCAAGTGTCAGTGTTATCACCCCTGCAATCACTCCTGCCTTT
CACAGCCCTCTAGCACTCTGC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXAGGGGAAATTGTGGTGGAGAAGGAGGGAGGCAAAGGGGAGG
GGAGATGGATGAAGAACTTTGAAGGGAGAACTGAAAAGGGGAGCAGCATT
TGGAATGTAAAGAAATAAAACAACTTAAAAAAAAAAGAAATACACTTAGC
CAACAATCTACTGGTAAGAACTTTGGAATACTGTGCTACTCACAGTGGAA
GAAAGGTTCCTAACTTGGGCTCCCGGTACCTACAAGAAAAAAAAATTTTC
CAGGGAAACAAAATTGTGTTTTCCAAAAAAAAAACCCTTGGAAAAGAAAC
CCCGGTGGGAAAATTTTTGGAAAACCTTGGGGGGATCCTCAAAAGGGGGG
GGGAAGGCCCCCCCCTTTGGGACCTCGGGCGGGGAAAAAAAAAAAAAACA
TTGTTCTTTTTCCCCCCAGGAAAAATTAAAAAACCCCAAAAACCCCCCCG

Query= MSMg01no500_f18.b1 MSMg01no500_f18.b1 CHROMAT_FILE:
MSMg01no500_f18.b1 PHD_FILE: MSMg01no500_f18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:59 2005
         (374 letters)



>mm_chr3_81742799_81743572
          Length = 774

 Score =  700 bits (362), Expect = 0.0
 Identities = 371/374 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   acatgaacataaggaatcactttaacagaatagggaatcaaatgacatggagttcttccg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 acatgaacataaggaatcactttaacagaatagggaatcaaatgacatggagttcttccg 515

                                                                       
Query: 61  taagacggtgtatgttgtctgggatctacagcatgcttgggatttgtaacgatcaatcta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 taagacggtgtatgttgtctgggatctacagcatgcttgggatttgtaacgatcaatcta 455

                                                                       
Query: 121 tttggttgccaagtagttagagcaagagtattttaaatacttgtagacctaattgtaaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tttggttgccaagtagttagagcaagagtattttaaatacttgtagacctaattgtaaac 395

                                                                       
Query: 181 gattagaagatgattgccagaccttctctaagatatggatctcacagtggcccctgcagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gattagaagatgattgccagaccttctctaagatatggatctcacagtggcccctgcagc 335

                                                                       
Query: 241 agccacccatgtagggctcctgtgaatgatggtctctttcacttgctaaaccagacactg 300
           |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 agccgcccatgtatggctcctgtgaatgatggtctctttcacttgctaaaccagacactg 275

                                                                       
Query: 301 gttgcaggcttccaagtgtcagtgttatcacccctgcaatcactcctgcctttcacagcc 360
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gttgcaggctgccaagtgtcagtgttatcacccctgcaatcactcctgcctttcacagcc 215

                         
Query: 361 ctctagcactctgc 374
           ||||||||||||||
Sbjct: 214 ctctagcactctgc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space:   279225
Effective search space used:   279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)