XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCGCGGAATTCTACC
AGACTTCCACAGAAGCACTAATGCCAATATTACTCAAACTAGTCCACAAA
ATAGAAACAGGAGGAACACTGCCAAACTGATTCTATGAGGCCTCAGTCAC
CCTAATATTTAAACCACACAAAGACTCAACAAAGAAAGAGAATTTCAGAC
CAATTTCTCTTACAAACATTGATGTAAAAATATTCAATAAAAGACTCTCA
AACCGAATCCAGGAATACATCAAAGACATGATCTAACAAAAGATCAAATA
GGTCTCATCCCAGGGATGCTGGGATGGTTCAATATATAAAAATTCATCAA
TGTATGCTTCAGTCCTGCATTGAGGGGAGAACAGGACAGTCATGGGAGGT
GGAGAGGGAGGGGACCTGGGAGGGAGAGAGGAGAGGGAGAAAATAANGGG
GGNNGNNNNNGGNNNNGGNNNNNNGNNNGNNGGGNGNNNGNNNGNNGNGG
GGNGNNGGNGNNGGGGGNGGGGGGGGGNGGGGGNGGGGGNGGNGNNGGGG
GGGGNNGNGGNNGNGGGGGNGGGGGGGGGGNGGGGGGNGNNGGGGGGGGG
GNNGGNNNNNNGGGGGGGGGGGGNGGGGGGGGGGGGNGNGGGNGGGGNGN
NNGGGGGGGNNGGGGGGNGGGGGNNNNGGGNGGGGGGGGGGGGGGGGGNN
GGGGGGGGGGGGGGGNGGGGGGGGGGGNGGGGGNGGNGGGG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTATTAGAACAAGTAAATACTTTTTTC
CCAATTCAGTATTGCAACAGGTATTGCTGTTTGAAAATGAGGTCTTCTAT
GTGACGCAGCCTGACCTGGAACCCTTGATCCTCCTTTCTCAGCCTCCAGG
GTTGGGATTACTAGCATGCACCACTATGCTGAGAGAAAATGTCAATAAAT
TCTATAGAAAACAAAACTATGGTACAAAAGCAAAAAATGGGATTCCCCCA
TAAAAACAAAATCCAAAACAGTCTTCACTATGAAAGCTGCTGAGAAGGGA
AGTTAAGGAAAATTGTTTACATTTCTGTGAAAAGACACAAGCTAGAAAGA
CCAAAGACGACAGCAGTGAACAGGTGACACAAATGACATACACAGCACAT
ACTAAGATGAATACCAGGAGTTTCTGGTTTATAATTCCTTCTGAAACTTC
ACTTATGATTTAAGACAAATACCTAAAACCACCGTAACCTCTTAATAAGC
AAATCATGTACAAAAATGTAATTTAAAATATCAGAAAGGGGAAGTTGCAC
CTGTTTAGAGCAGTTTTTGTGGGTATTATAGACATGTGAGCATGCATGCA
CTCACACTCATATACACAGGACTGTATGCACATACACACAAATACTCATG
CACACACAGCAATGCACCTCTAAAAAGGCTACACATTTTATAACTCAAAG
TATGACATCCCGG

Query= MSMg01no501_l22.g1 MSMg01no501_l22.g1 CHROMAT_FILE:
MSMg01no501_l22.g1 PHD_FILE: MSMg01no501_l22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:37 2005
         (624 letters)



>mm_chr3_142487851_142488872
          Length = 1022

 Score = 1180 bits (610), Expect = 0.0
 Identities = 620/624 (99%), Gaps = 2/624 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tattagaacaagtaaatacttttttcccaattcagtattgcaacaggtattgctgtttga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattagaacaagtaaatacttttttcccaattcagtattgcaacaggtattgctgtttga 260

                                                                       
Query: 61  aaatgaggtcttctatgtgacgcagcctgacctggaacccttgatcctcctttctcagcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatgaggtcttctatgtgacgcagcctgacctggaacccttgatcctcctttctcagcc 320

                                                                       
Query: 121 tccagggttgggattactagcatgcaccactatgctgagagaaaatgtcaataaattcta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccagggttgggattactagcatgcaccactatgctgagagaaaatgtcaataaattcta 380

                                                                       
Query: 181 tagaaaacaaaactatggtacaaaagcaaaaaatgggattcccccataaaaacaaaatcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagaaaacaaaactatggtacaaaagcaaaaaatgggattcccccataaaaacaaaatcc 440

                                                                       
Query: 241 aaaacagtcttcactatgaaagctgctgagaagggaagttaaggaaaattgtttacattt 300
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaacagtcttcaccatgaaagctgctgagaagggaagttaaggaaaattgtttacattt 500

                                                                       
Query: 301 ctgtgaaaagacacaagctagaaagaccaaagacgacagcagtgaacaggtgacacaaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgtgaaaagacacaagctagaaagaccaaagacgacagcagtgaacaggtgacacaaat 560

                                                                       
Query: 361 gacatacacagcacatactaagatgaataccaggagtttctggtttataattccttctga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacatacacagcacatactaagatgaataccaggagtttctggtttataattccttctga 620

                                                                       
Query: 421 aacttcacttatgatttaagacaaatacctaaaaccaccgtaacctcttaataagcaaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aacttcacttatgatttaagacaaatacctaaaaccaccgtaacctcttaataagcaaat 680

                                                                       
Query: 481 catgtacaaaaatgtaatttaaaatatcagaaaggggaagttgcacctgtttagagcagt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catgtacaaaaatgtaatttaaaatatcagaaaggggaagttgcacctgtttagagcagt 740

                                                                       
Query: 541 ttttgtgggtattatagacatgtgagcatgcatgcactcacactcatatacacaggactg 600
           |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||
Sbjct: 741 ttttgtaggtattatagacatgtgagcatgcatgcactcacactcata--cacaggactg 798

                                   
Query: 601 tatgcacatacacacaaatactca 624
           ||||||||||||||||||||||||
Sbjct: 799 tatgcacatacacacaaatactca 822


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1022
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1012
Effective search space:   621368
Effective search space used:   621368
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)