CTATACGACTCACATTAGTCAGAAACGGCGCGGAANNCAAGGCCCAATTC
TAAAAAGAGGAAAGNAATCTACAGCAAACCAGTAGCCAACAGCAAACTAA
ATGATGACAAGCTGGAAGCAATTCCAATAAAATCAGGTGCTAGACAAGGC
TGCCCACTTTCTCCATACCTATTCAACTTAGTACTTGAAGTCCTAGCCAG
AGCAATTCAACAACAAAAGAGATCAAGGGGATGGAAATTGTTTTGGAAGA
AGTCAACATATCATTTTTTGCAGATGATATGATAATACTTATAAGTGACC
CTAAAAATTCCATCNGAGAACTCCTAAACCTGATAAACATCTGCAGTGAA
GTAGCTGGATATAAAATTAACTCAAACTAGTCAATGGCCTTTCTCTATAC
AAAGGATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCACAA
TAGTCATAAATAATATAAATACCTTGGCGTGACTCTAACTAAGGAAGTGA
AAGATCTGTATAATACGAACTTCAATTCTCTGAAGATAGAAATTAAAGAT
CTCAGAAGATTGAAAGATCTCCCATGCTCATGGACTGGCAGGATCAATAT
AGTAAAAATGGCTGTCTTGCCAAAAGCAATCTACATATTCAATGCAATCC
CCATCCTAATTCCAACTCAATTCTTCAACGAATTGGAAAGCGTAATCTCC
AAATTCATCTGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXACTCAAGTATTTGTGCCATCTTTGAATTCATTAAATATTTAT
ATATCTGTATCTGTATCTGTATCTATACATGTTTCTCTGTATTTCATTGT
AATTTCATTACTACTGAATTCTCTTACTGTGGATATGGCTAATTTTCCAT
AAAAACCTTGCTGTTTTGATTATTTTCAGATTTGATTCTCTAAAAGGATT
TGGTTTTGATTGTATTTTTAAACATTAAAATATAATTACATATTTCCCCC
CTTTTCTTTCTTTCTTCTATACTTTTTATCTGTATGGTAACTTCCTCCTA
AATTCCAGCTTCATTTTCCTTAGTTGTCATTAAATACTGTTACTTAGGCT
CCATTTCTCCACCTGTTATGGCATGACTAACCTTCTGCCACAACAGGTAG
CACCGGAGCAGGGAAGGAAGGCAGGAACACCTGGGGGATGGATGTCTCAG
GTGTCGACTGAGTGACATGAAACAGACTCTTGAGAGACAGGCTTCAGTGA
GATAGTTAATTTAATGCAAGGATAGGTGGTGGCAAAGGCTATTTAAACCT
TTGGGGGATGAGTAGGAGCTTTTGGGGTGAATGTACATCCTTGGCCAGGG
CCAGTGTGCTGAGGATGCTTCATTTCCATGAAGAAGAATTCTGGGTGCTG
CTAGACATTACCTTATAAGGGAAGAG

Query= MSMg01no501_o21.g1 MSMg01no501_o21.g1 CHROMAT_FILE:
MSMg01no501_o21.g1 PHD_FILE: MSMg01no501_o21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:50 2005
         (550 letters)



>mm_chr3_114149912_114150856
          Length = 945

 Score =  992 bits (513), Expect = 0.0
 Identities = 539/551 (97%), Gaps = 7/551 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   caagtatttgtgccatctttgaattcattaaatatttatatatctgtatctgtatctgta 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 201 caagtatttgtgccatctttgaattcattaaatatttatatatctgtatctgtatct--- 257

                                                                       
Query: 61  tctatacatgtttctctgtatttcattgtaatttcattactactgaattctcttactgtg 120
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ---atacatgtttctctgtatttcattgtaatttcattactactgaattctcttactgtg 314

                                                                       
Query: 121 gatatggctaattttccataaaaaccttgctgttttgattattttcagatttgattctct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gatatggctaattttccataaaaaccttgctgttttgattattttcagatttgattctct 374

                                                                       
Query: 181 aaaaggatttggttttgattgtatttttaaacattaaaatataattacatatttcccccc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aaaaggatttggttttgattgtatttttaaacattaaaatataattacatatttcccccc 434

                                                                       
Query: 241 ttttctttctttcttctatactttttatctgtatggtaacttcctcctaaattccagctt 300
           ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ttttctttcttccctctatactttttatctgtatggtaacttcctcctaaattccagctt 494

                                                                       
Query: 301 cattttccttagttgtcattaaatactgttacttaggctccatttctccacctgttatgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cattttccttagttgtcattaaatactgttacttaggctccatttctccacctgttatgg 554

                                                                       
Query: 361 catgactaaccttctgccacaacaggtagcaccggagcagggaaggaaggcaggaacacc 420
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 catgactaaacttctgccacaacaggtagcaccggagcagggaaggaaggcaggaacacc 614

                                                                       
Query: 421 tgggggatggatgtctcaggtgtcgactgagtgacatgaaa-cagactcttgagagacag 479
           |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 615 tgggggatggatgtttcaggtgtcgactgagtgacatgaaaacagactcttgagagacag 674

                                                                       
Query: 480 gcttcagtgagatagttaatttaatgcaaggataggtggtggcaaaggctatttaaacct 539
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gcttcagtgagatagttcatttaatgcaaggataggtggtggcaaaggctatttaaacct 734

                      
Query: 540 ttgggggatga 550
           |||||||||||
Sbjct: 735 ttgggggatga 745


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 945
Length adjustment: 10
Effective length of query: 540
Effective length of database: 935
Effective search space:   504900
Effective search space used:   504900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)