XXXXXXXXXXXXXXXXXXXXXXXXXTCATAAATCCGCGGAATTCTCCAGG
CTTTTCAAGTTCCTAGAGTCTCAGAGAGCATGCCTATAAGCTTGCCTACT
GAGACATTCCTTCCTGGAAAAGGTATTTAAGCTCAGGCCCACTTTGAGAA
GTAGGGTATGGTTTTCTGCATCCATTTCCTGCCATGACAATAAGCTGTTT
TGGAAGCACAGACTGGCTCTTTTCATTGAGTTTCACAGTGGGGAGCCATG
GAGAAGGCCACAGCCCACAGAGCCACAGTCTAATCTCCAGGAGAAATGCC
TCTCTTCATTCCCAGTCTCTTTCACCACCAAGACTGCTATGCATCAAGCC
AAGGACTCTCCCTGCTGGGACTAGCCCGATCTCCCCTTTTCCCCTGGCCC
CCAGCTGAACACAGTCTTCTCAGCTCTTCATGGACTCCCTGATGTTCAAG
AGCCTGAGAACCTCATGGCCTGAGCCTCATGGCAGGCCCAAGGACCCTGA
ACCAGTTCCAGCTCTCCTAAATCTGAGACTGCTGTGTTTTCCCACCCCTC
AGAGCTGTGTCTTTGCACATCCCTACTGCCCAACACCTGCCCTGGTAGCA
TTTAGGGATAAACCCAGCAGTGAAACTCCCTGCGCTCCAGCTCCCCAAGT
AGCCTTGCCCTTTGGATGAGCAGACATGGACACCCAATCCTACCATCTAC
AATGTAAATTTATGATGGAGAAGAAGACATTTGTTAC

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTGTTTGATGCTTCGCATGTGTGTATGTGTGTGTTTG
TGTGTGCACGTGCTTGTGAGTGCACATATATGCACACAAGCATGGTCTTG
AATCTTCATGGACAGCCATGGAGGCCAGAGGCCAACCTTCTTCTCTTGGT
GTCTTCCTTAATTTGCTTTCTACCTTATTTTTGATACATGGTCTTCTTTG
AACCCAACCTTCACTGATACTGCTAAAGATGGCAATGAGCAAGCCTCAGG
AATCTTCCTCCCTCCATCTCGCCAGCACTGGGATTACAGGTGTGTACCAC
AACACAAGGGTATGGCATGAGTACTCAGATGCAATTCAGGGCCCATGGTA
GTACAGGAAGTACTTTACTAACTGAGACATATTCACATCCCTGGTGTATA
CTTCTGTTAGTTTACCAGAACACATTAGGCTATTGTTTTAAAAATAAAAT
TAGATGGGATGAAATGTCTTCCTAATCCAGCTGCCCAACTAGACTCTACA
CAGTGGTTTATTTCTAAAACCNAAGATAATAAATTAAATAAATATAAATA
AACAAAATTACTTAAGAAAATCTAAAATACTGTAATAAGAACACAAAAGT
GCATATTTCTGAACCAATATAATAGGGTAGAAAATATTAAGAAGGAAATT
ACTGCTTTGCCACACTAAAAACATACATTACATAAAACTGCATGCATATN

Query= MSMg01no501_o22.g1 MSMg01no501_o22.g1 CHROMAT_FILE:
MSMg01no501_o22.g1 PHD_FILE: MSMg01no501_o22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:50 2005
         (572 letters)



>mm_chr3_24212504_24213475
          Length = 972

 Score = 1077 bits (557), Expect = 0.0
 Identities = 568/572 (99%), Gaps = 1/572 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtttgatgcttcgcatgtgtgtatgtgtgtgtttgtgtgtgcacgtgcttgtgagtgca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tgtttgatgcttcgcatgtgtgtatgtgtgtgtttgtgtgtgcacgtgcttgtgagtgca 261

                                                                       
Query: 61  catatatgcacacaagcatggtcttgaatcttcatggacagccatggaggccagaggcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 catatatgcacacaagcatggtcttgaatcttcatggacagccatggaggccagaggcca 321

                                                                       
Query: 121 accttcttctcttggtgtcttccttaatttgctttctaccttatttttgatacatggtct 180
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 322 accttcttctcttggtgtcttccttaatt-gctttctaccttatttttgatacatggtct 380

                                                                       
Query: 181 tctttgaacccaaccttcactgatactgctaaagatggcaatgagcaagcctcaggaatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctttgaacccaaccttcactgatactgctaaagatggcaatgagcaagcctcaggaatc 440

                                                                       
Query: 241 ttcctccctccatctcgccagcactgggattacaggtgtgtaccacaacacaagggtatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcctccctccatctcgccagcactgggattacaggtgtgtaccacaacacaagggtatg 500

                                                                       
Query: 301 gcatgagtactcagatgcaattcagggcccatggtagtacaggaagtactttactaactg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcatgagtactcagatgcaattcagggcccatggtagtacaggaagtactttactaactg 560

                                                                       
Query: 361 agacatattcacatccctggtgtatacttctgttagtttaccagaacacattaggctatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 561 agacatattcacatccctggtgtatacttctgttagtttaccagaacacattaagctatt 620

                                                                       
Query: 421 gttttaaaaataaaattagatgggatgaaatgtcttcctaatccagctgcccaactagac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gttttaaaaataaaattagatgggatgaaatgtcttcctaatccagctgcccaactagac 680

                                                                       
Query: 481 tctacacagtggtttatttctaaaaccnaagataataaattaaataaatataaataaaca 540
           ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 681 tctacacagtggtttatttctaaaaccaaagataataaattaaataaatgtaaataaaca 740

                                           
Query: 541 aaattacttaagaaaatctaaaatactgtaat 572
           ||||||||||||||||||||||||||||||||
Sbjct: 741 aaattacttaagaaaatctaaaatactgtaat 772


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)