GTCGAGGATCCGCGGAATTCAGGTCTTTAACGCTGATGCATATTATGTCT
CACTGGTCTGTCTGCTCTCCTGGACCTGGGCTGTCAGTACCTTCCATCAC
TCCACCTATACCTGAGGGTTAGAATATTGTTGTTGATGCCGATAGGGTAT
TGCATAGTTTCCTATGATCACCTTTCATGCTGCAGGGCCTGCGTTGTTGG
GACAAGCCTTCGAACCACTCTCCCATCTAGCATTACTTTCTTCACTCTGG
TAATTGTGTGGAAGAACCCAGGGATTACATAAATGGCAGCTCTAATGTCT
ATAGTCGGCTGGATAATGGCTGCCTGGAACTGGGATCAAATGCAGCCATA
TATCCAACCCTTGCACAGCCTGAGCTTATTCCTTATGGTGGCCTAGTAGA
CAGGTGTGTCTTGCTTTTTGTCATTCCTGTTAATAAAACTGTATCTGTTC
TTTACATTGAGACATTGCATTGCCCATCATTTTCATGGCAATGACCTTGT
CTCCAAAGGCAGGCAGCACAATGAAGCTGCCTGTGCCTCCACTGCCATTC
AATCCCTGTTTGGTATCAGTGGTAGGCAGCTTCCAGGTGTTGGCCTCTCT
GCACTGATTATGGAGTTTATAGAACTGTGTCTCCTCCCCAGATGGTGACT
AGACCCACCAGGAGAGGCTCTCTGGACTCTAGGGACTCTCTCGGGTTTGC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXTTTTGAATTTGGGACATTTATTGTTAATTTCTCCTGATAATT
AATTCAAGCCCTTTGCCAATTTTCATTTTCTGCCTATAATGGGGCAATTT
TTTCATTAATTAAAGGTACAGCAATTTCTGATGGATATATTCCTAATTGA
TAAAGTGTCATTTTTACTTTCAGAATCAATTCAGGAATTATATATATAAC
ATATATATAATTTTGTCTTTTTTGTGTTAAAAATATGGAGTTTAATGTGT
ATCATTATCTCTCTGCAAATGAATTCCTATGGGCAAATTATAATCACGCT
TTGAATCTAAGTAATCCTTATGTGGATCCACTAATTTCTATTGATATTTT
TTTTTAACCAGAGCCAATTTCCCCTCAGCCTCAGCTTACAATTTTCTTGG
ACAACTTAAATTTGTTATTACCTTGTAAACTTTGAAATTAATTATGCAGT
TCTTGAGTAGTAAATCCAGTTCTAGACTTTAGCCAGTTAATATCTCCCAT
TAAGAAAATCATTAAGAGTTTGTAATTGATCTCTCCTGATTTGTAATTTT
TGTGATCAAATTTTCAGTAAACCTGTCTTATATGCTATATAAGTCATCGA
TCCTCCTCTGTGTATTTTTTCAAAAGCAATTGATAGTCCCGTGAAAAGTC
AAATTGCTCATCAAACATATTTTTCTAGNTAGCTGTGTCTGAGTCANGCA
GAN

Query= MSMg01no502_k23.b1 MSMg01no502_k23.b1 CHROMAT_FILE:
MSMg01no502_k23.b1 PHD_FILE: MSMg01no502_k23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:47 2005
         (555 letters)



>mm_chr3_23850957_23851911
          Length = 955

 Score = 1048 bits (542), Expect = 0.0
 Identities = 548/550 (99%)
 Strand = Plus / Minus

                                                                       
Query: 6   ggaattcaggtctttaacgctgatgcatattatgtctcactggtctgtctgctctcctgg 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 ggaattcaggtctttaacgctgatgcatattatgtctcactggtctgtctgctctcctgg 696

                                                                       
Query: 66  acctgggctgtcagtaccttccatcactccacctatacctgagggttagaatattgttgt 125
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 695 acctgggctgtcagtaccttccatcactccacctatacttgagggttagaatattgttgt 636

                                                                       
Query: 126 tgatgccgatagggtattgcatagtttcctatgatcacctttcatgctgcagggcctgcg 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tgatgccgatagggtattgcatagtttcctatgatcacctttcatgctgcagggcctgcg 576

                                                                       
Query: 186 ttgttgggacaagccttcgaaccactctcccatctagcattactttcttcactctggtaa 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ttgttgggacaagccttcgaaccactctcccatctagcattactttcttcactctggtaa 516

                                                                       
Query: 246 ttgtgtggaagaacccagggattacataaatggcagctctaatgtctatagtcggctgga 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ttgtgtggaagaacccagggattacataaatggcagctctaatgtctatagtcggctgga 456

                                                                       
Query: 306 taatggctgcctggaactgggatcaaatgcagccatatatccaacccttgcacagcctga 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 taatggctgcctggaactgggatcaaatgcagccatatatccaacccttgcacagcctga 396

                                                                       
Query: 366 gcttattccttatggtggcctagtagacaggtgtgtcttgctttttgtcattcctgttaa 425
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 395 gcttattccttatggtggcctagtagacaggagtgtcttgctttttgtcattcctgttaa 336

                                                                       
Query: 426 taaaactgtatctgttctttacattgagacattgcattgcccatcattttcatggcaatg 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 taaaactgtatctgttctttacattgagacattgcattgcccatcattttcatggcaatg 276

                                                                       
Query: 486 accttgtctccaaaggcaggcagcacaatgaagctgcctgtgcctccactgccattcaat 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 accttgtctccaaaggcaggcagcacaatgaagctgcctgtgcctccactgccattcaat 216

                     
Query: 546 ccctgtttgg 555
           ||||||||||
Sbjct: 215 ccctgtttgg 206


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space:   515025
Effective search space used:   515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)