Query= MSMg01no502_n17.b1 MSMg01no502_n17.b1 CHROMAT_FILE:
MSMg01no502_n17.b1 PHD_FILE: MSMg01no502_n17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:59 2005
(578 letters)
>mm_chr3_89228263_89229242
Length = 980
Score = 1094 bits (566), Expect = 0.0
Identities = 576/580 (99%), Gaps = 2/580 (0%)
Strand = Plus / Minus
Query: 1 gaaaaagcagtctagtgggaggtgctgggctgtaactccaccctaggcaaacaaaaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 gaaaaagcagtctagtgggaggtgctgggctgtaactccaccctaggcaaacaaaaggaa 721
Query: 61 gaaactgtccctgcagcaggcatggccctcaggtctcttgatgagccactggagagctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gaaactgtccctgcagcaggcatggccctcaggtctcttgatgagccactggagagctga 661
Query: 121 cacagcagaggagggacaaagggtcacacaggtcattaccttttctgaaccccttggaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 cacagcagaggagggacaaagggtcacacaggtcattaccttttctgaaccccttggaac 601
Query: 181 tcaagcatgggaagacacttcctgcctcgccctctcccaccagctcacctgtcatggggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tcaagcatgggaagacacttcctgcctcgccctctcccaccagctcacctgtcatggggg 541
Query: 241 gtgaccagcttctgcggattcctgagatactgtttgaagcgcaactcaaaggcctgcccg 300
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gtgaccagcttcggtggattcctgagatactgtttgaagcgcaactcaaaggcctgcccg 481
Query: 301 atggtgctgatgacatcctgagcaagcccttcaggacactccaggatatggcaggctggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 atggtgctgatgacatcctgagcaagcccttcaggacactccaggatatggcaggctggg 421
Query: 361 acacagtggagaccaccagt--gctctgaggcagggggctggcatgacctgtgggaggga 418
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 420 acacagtggagaccaccagtgagctctgaggcagggggctggcatgacctgtgggaggga 361
Query: 419 gcccccacccaagtccctcccagcaagggaaccctatcaagtgtaactgcttttcagata 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gcccccacccaagtccctcccagcaagggaaccctatcaagtgtaactgcttttcagata 301
Query: 479 actggccccacccagtgctgcccgcaagcctcacctctctgattcacagggtctttggca 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 actggccccacccagtgctgcccgcaagcctcacctctctgattcacagggtctttggca 241
Query: 539 acataggcaacatactcagctgtgtcctggagagggtaga 578
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 acataggcaacatactcagctgtgtcctggagagggtaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 980
Length adjustment: 10
Effective length of query: 568
Effective length of database: 970
Effective search space: 550960
Effective search space used: 550960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_n17.g1 MSMg01no502_n17.g1 CHROMAT_FILE:
MSMg01no502_n17.g1 PHD_FILE: MSMg01no502_n17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:59 2005
(579 letters)
>mm_chr3_89084513_89085491
Length = 979
Score = 1065 bits (551), Expect = 0.0
Identities = 572/579 (98%)
Strand = Plus / Plus
Query: 1 acctctcgaatcagcagctgtctggagaggggttggcggcgtctgcgcctgagatggagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctctcgaatcagcagctgtctggagaggggttggcggcgtctgcgcctgagatggagc 260
Query: 61 tggcgggcaggtgtttgattaggctcgagtgcattcttggagccgtaaagtcaaaagctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcgggcaggtgtttgattaggctcgagtgcattcttggagccgtaaagtcaaaagctg 320
Query: 121 agtgcttggtagtttgcgtgtgtggcggtgagcccgtgtgcgttgcagggtgtgatgggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtgcttggtagtttgcgtgtgtggcggtgagcccgtgtgcgttgcagggtgtgatgggc 380
Query: 181 gggggtttctgtccctggtctctcttctttgcggctgcgcatcagagcaaggcgcggacc 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 gggggtttctgtccctggtctctcttctttgcggctgcgcatcagggcaaggcgcggacc 440
Query: 241 cggttttctttgcagggtccggcccagcttccgaggcttccaggtcgtttcatcccggtt 300
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 cggggctctttgcagggtccggcccagcttccgaggcttccaggccgtttcatcccggtt 500
Query: 301 ttttacggccaggcttggcggcagaccctgtaattacatcgggccaggacgccgtggcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttacggccaggcttggcggcagaccctgtaattacatcgggccaggacgccgtggcca 560
Query: 361 gctcggtgctgagcctgcaggggaggagccaggaattgaggagggctttggctttcctcc 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 gctcggtgctgagcctgcaggggaggagccaggaattgaggagggctctggctttcctcc 620
Query: 421 ttccctcctaggaggtgggccctgcttgtcgctctcaccataaatatttactgagctcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttccctcctaggaggtgggccctgcttgtcgctctcaccataaatatttactgagctcca 680
Query: 481 actaggtgccgcgccccgtaaccccgcactagggtcagggtccgtctttactcaagcata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 actaggtgccgcgccccgtaaccccgcactagggtcagggtccgtctttactcaagcata 740
Query: 541 cgccacccgtgcgcaacctgccctaggcgacgtgcctga 579
||||||| |||||||||||||||||||||||||||||||
Sbjct: 741 cgccaccggtgcgcaacctgccctaggcgacgtgcctga 779
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
