Query= MSMg01no503_e18.b1 MSMg01no503_e18.b1 CHROMAT_FILE:
MSMg01no503_e18.b1 PHD_FILE: MSMg01no503_e18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:32 2005
(618 letters)
>mm_chr3_144118528_144119545
Length = 1018
Score = 1123 bits (581), Expect = 0.0
Identities = 605/613 (98%), Gaps = 2/613 (0%)
Strand = Plus / Plus
Query: 7 aatcacttaaaggtac-ctcttctttataccttagcaaattgaaatacgactaacaaaat 65
||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 207 aatcacttaaagg-acattcttctttatacctcagcaaattgaaatacgactaacaaaat 265
Query: 66 gactaaagatgattgtaagatttttaaaggtggatatataagcttgtccaaataaaaaca 125
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 266 gactaaagatgattgtaagatttttaaaggtggatatataagcttgttcaaataaaaaca 325
Query: 126 tataagctagtcaagtatctaaaattctctttcaattttaatgtgtgggtttgtgcaata 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tataagctagtcaagtatctaaaattctctttcaattttaatgtgtgggtttgtgcaata 385
Query: 186 taagtgtgactgcaggtgagtacagggtcgcccctcgcagagctggggttagactgtttc 245
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 taagtgtgactgcgggtgagtacagggtcgcccctcgcagagctggggttagactgtttc 445
Query: 246 gagctgcctggtgtgggtcagggaactgagttgaggccctatgagagagcagtgggcatc 305
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 446 gagctgcctggtgtgggtcagggaactgagctgaggccctatgagagagcagtgggcatc 505
Query: 306 cttggttgctgcggcaacgctccagctcccaagcgcttcctaacttcctggaattggaag 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 cttggttgctgcggcaacgctccagctcccaagcgcttcctaacttcctggaattggaag 565
Query: 366 tatacaaaaagctaacatgagaaattctgtaagtgtccattaattatttttttaaaaaaa 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tatacaaaaagctaacatgagaaattctgtaagtgtccattaattatttttttaaaaaaa 625
Query: 426 tcgagaaagaatttttaaaaagaaaacaagtagttaatttaaactgtttgtgtgccagca 485
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ttgagaaagaatttttaaaaagaaaacaagtagttaatttaaactgtttgtgtgccagca 685
Query: 486 gctatacaatttctctgtacaataaacaacagctggtcaggactctcttctggagactag 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gctatacaatttctctgtacaataaacaacagctggtcaggactctcttctggagactag 745
Query: 546 acagacacagagggatggcagggcccactcctctacactgcagggaaccaagctgcagct 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 acagacacagagggatggcagggcccactcctctacactgcagggaaccaagctgcagct 805
Query: 606 tcagtcccgggag 618
|||||||||||||
Sbjct: 806 tcagtcccgggag 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_e18.g1 MSMg01no503_e18.g1 CHROMAT_FILE:
MSMg01no503_e18.g1 PHD_FILE: MSMg01no503_e18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:32 2005
(566 letters)
>mm_chr3_144158033_144158999
Length = 967
Score = 642 bits (332), Expect = 0.0
Identities = 365/376 (97%), Gaps = 4/376 (1%)
Strand = Plus / Minus
Query: 193 aggagaggatgctgcgtattggcttgtatagcactcagagccaccatccgaggatgacac 252
|||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 agga-aggatgctgtgcattggcttgtatagcactcagagccaccatccgaggatgacac 909
Query: 253 ctgtcacagtgagctgggcccgcccacatcaatcaccacttaagaaaacaccccatgtgg 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 ctgtcacagtgagctgggcccgcccacatcaatcaccacttaagaaaacaccccatgtgg 849
Query: 313 tggggatattttctccattgaagtttcctttttcccaaatgactctagcctgtgttgcgt 372
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 848 tggggatattttctccattgaagtttcctctttcccaaatgactctagcttgtgttgcgt 789
Query: 373 tgacataaaactagccacacacttggtttattattttacttaagttgttc-tatgatatg 431
|| ||||||||||||||||||||||||||||||||||||||||||||||| | || ||||
Sbjct: 788 tggcataaaactagccacacacttggtttattattttacttaagttgttcttgtgttatg 729
Query: 432 tcgtgatagctcaaggaattctagaagacctagtcctgtggacaacctacttctgtaatt 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 tcgtgatagctcaaggaattctagaagacctagtcctgtggacaacctacttctgtaatt 669
Query: 492 tttttgaacgtt-aaattaggttaatcctgatgcctttttaaaactatagtcattcatat 550
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tttttgaacgttgaaa-taggttaatcctgatgcctttttaaaactatagtcattcatat 610
Query: 551 tcgttacatacataca 566
||||||||||||||||
Sbjct: 609 tcgttacatacataca 594
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 967
Length adjustment: 10
Effective length of query: 556
Effective length of database: 957
Effective search space: 532092
Effective search space used: 532092
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
