Query= MSMg01no503_g18.b1 MSMg01no503_g18.b1 CHROMAT_FILE:
MSMg01no503_g18.b1 PHD_FILE: MSMg01no503_g18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:41 2005
(597 letters)
>mm_chr3_67665164_67666160
Length = 997
Score = 1048 bits (542), Expect = 0.0
Identities = 578/590 (97%), Gaps = 1/590 (0%)
Strand = Plus / Minus
Query: 8 attccaagcatctcacaatcacagaaactatctgcagctggcaaaatcacatctccacca 67
|||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 997 attccaagcatcacataatcacagaaactatctgaagctggcaaaatcacatctccacca 938
Query: 68 gagcacgagacaaatcatagtcagctgccatgggcaatccaaagcagcctcatatcccac 127
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937 gagcacgaga-aaatcatagtcagctgccatgggcaatccaaagcagcctcatatcccac 879
Query: 128 acctgggatcaaaatgaaaacactttcccataatacctctgagtttctcaaagaaaccaa 187
|||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 878 acctgggatcaaaacaaaaacacattcccataatacctctgagtttctcaaagaaaccaa 819
Query: 188 aactccaaaaatgtcactacaattattttacactgtttctgagaattgcataattactaa 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 aactccaaaaatgtcactacaattattttacactgtttctgagaattgcataattactaa 759
Query: 248 ttacttcagggagtataaggaaattgaactcagaaacagtaataactttataaattaata 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 ttacttcagggagtataaggaaattgaactcagaaacagtaataactttataaattaata 699
Query: 308 ctgtccatctgtagcctaagtagacctaacccaactggggagtatctctccccaatacta 367
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 698 ctgtccatctgtagcataagtagacctaacccaattggggagtatctctccccaatacta 639
Query: 368 aaagaattcaagtcatgattggctgtcctaccatcagcatgtgtggttgtatcctgcatt 427
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 638 aaagaattcaagtcatgattggctgacctaccatcagcatgtgtggttgtatcctgcatt 579
Query: 428 agatagcttatttaatttgtgacttccaaagtcatgatcagtacaagcattctttgttct 487
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 agatagcttatttaacttgtgacttccaaagtcatgatcagtacaagcattctttgttct 519
Query: 488 ggagtgaggatatagctcagtggtagaatggctaagtgagaaacactggtttcagttttc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ggagtgaggatatagctcagtggtagaatggctaagtgagaaacactggtttcagttttc 459
Query: 548 tctactgcaatttttaaaaagtgcacatttatatcgcttccatttttagg 597
|||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 458 tctactgcaattttaaaaaagtgcacatttatatcgcttccatttttagg 409
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_g18.g1 MSMg01no503_g18.g1 CHROMAT_FILE:
MSMg01no503_g18.g1 PHD_FILE: MSMg01no503_g18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:41 2005
(517 letters)
>mm_chr3_67481570_67482486
Length = 917
Score = 977 bits (505), Expect = 0.0
Identities = 514/517 (99%)
Strand = Plus / Plus
Query: 1 tgaatctatcttagttatcaaagaaatttaattttaaactttaaagatatgattaaagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaatctatcttagttatcaaagaaatttaattttaaactttaaagatatgattaaagat 260
Query: 61 gtaaagttgaatgggtatttctcttaatggaaacaattttcttggaaacttttatctttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaaagttgaatgggtatttctcttaatggaaacaattttcttggaaacttttatctttc 320
Query: 121 cactggaggtgttaatggtagaggaaacacaatgactaaccctccctaacaaccacagcc 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 cactggaggtgttaatggtagaggaaacacaatgactaaccctcccaaacaaccacagcc 380
Query: 181 tgactttctattcttgggacagaatgaagaaatgactctcacctgatagttcactccttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgactttctattcttgggacagaatgaagaaatgactctcacctgatagttcactccttc 440
Query: 241 tgatgctgtcttctggaggtcttgtgtggattttctaagtttatatatctgattactgat 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaggctgtcttctggaggtcttgtgtggattttctaagtttatatatctgattactgat 500
Query: 301 tgaaaattgagtattttatctctctattcttttaaaggttggctgttgaattcttgggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgaaaattgagtattttatctctctattcttttaaaggttggctgttgaattcttgggca 560
Query: 361 tcctggtggctttggtggtttggatttccatgtggaatctgggatgtggagaatgggttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcctggtggctttggtggtttggatttccatgtggaatctgggatgtggagaatgggttc 620
Query: 421 tgtaacattgtcttgcaatgtgtttccttcttgtgttttgtacatctgctgtaacagagg 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtaacattgtcttgcattgtgtttccttcttgtgttttgtacatctgctgtaacagagg 680
Query: 481 tttctttctgtttcaactttccccttttccaacaata 517
|||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttctttctgtttcaactttccccttttccaacaata 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
