Query= MSMg01no503_n23.b1 MSMg01no503_n23.b1 CHROMAT_FILE:
MSMg01no503_n23.b1 PHD_FILE: MSMg01no503_n23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:17 2005
(582 letters)
>mm_chr3_119543663_119544644
Length = 982
Score = 1087 bits (562), Expect = 0.0
Identities = 574/578 (99%)
Strand = Plus / Plus
Query: 5 gaattcaggaatgctacatgagaagggatgccacagagatccctagaaaagctgcattaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggaatgctacatgagaagggatgccacagagatccctagaaaagctgcattaa 264
Query: 65 ggctcttcatatctgtagtcactgtgaaggacacaaaacacagcctgcagcttggaaatt 124
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggctcttcatatctgtagtcgctgtgaaggacacaaaacacagcctgcagcttggaaatt 324
Query: 125 tgtaatgcttatatgtcacatcttgaacctattttgtgcattgattgttttcttctttgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtaatgcttatatgtcacatcttgaacctattttgtgcattgattgttttcttctttgc 384
Query: 185 ttgctggtctgaaagatgctatgaaaacagcaaggcaaagactggctggtccatatttca 244
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgctggtttgaaagatgctatgaaaacagcaaggcaaagactggctggtccatatttca 444
Query: 245 gagatttctagtaataagaagcttgccaggatgttgtagaaaactgccaggccatgggtg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gagatttctagtaataagaagcttgccaggatgttgtagaaaactgccaggccatgggtg 504
Query: 305 caacagtttccccatagaggttattaaggtgaaacaaaggattcaggcacacaagggaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caacagtttccccatagaggttattaaggtgaaacaaaggattcaggcacacaagggaag 564
Query: 365 cttccacatagagcttccccctctctgggaatatgatatgtaggcatctagatctagaac 424
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 565 cttccacatagagcttccccctctccgggaatatgatatgtaggcatctagatctagaac 624
Query: 425 cctcatctaaaagcaatggtaagtcttttcacctcaaggaacccaggttagaaactccct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cctcatctaaaagcaatggtaagtcttttcacctcaaggaacccaggttagaaactccct 684
Query: 485 catacacgcccttaatgttttttccatggtgactctaaaactcatcaagttgacaatcat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 catacacgcccttaatgttttttccatggtgactctaaaactcatcaagttgacaatcat 744
Query: 545 gtcaaagcacaaaagcttcatttttgtcacattgaggg 582
||||||||||||| ||||||||||||||||||||||||
Sbjct: 745 gtcaaagcacaaatgcttcatttttgtcacattgaggg 782
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_n23.g1 MSMg01no503_n23.g1 CHROMAT_FILE:
MSMg01no503_n23.g1 PHD_FILE: MSMg01no503_n23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:17 2005
(329 letters)
>mm_chr3_119697197_119697924
Length = 728
Score = 543 bits (281), Expect = e-159
Identities = 317/329 (96%), Gaps = 1/329 (0%)
Strand = Plus / Minus
Query: 1 caagaggaagatatgaaggcaagtgatgaggaggcttagctttagttcctttaaagagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 caagaggaagatatgaaggcaagtgatgaggaggcttagctttagttcctttaaagagga 469
Query: 61 aagcaagtcactgtctcctggtgtgagaaaaccaaccccgtgaaggatgcttcacataca 120
||||| |||||||||||||||||||||| ||||||||||| |||||||||| ||||||||
Sbjct: 468 aagcaggtcactgtctcctggtgtgagagaaccaaccccgggaaggatgctccacataca 409
Query: 121 cactggacaaaggtgaaatttgacatttttccttttggttttggttggtttgtttgtttg 180
|||||||||||| ||| ||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 408 cactggacaaagctgagatttgccatctttccttttggttttggttggtttgtttgtttg 349
Query: 181 ttttgtaatgagagagaaggaatgtggagctattgagagaaagagcatctataagaagtc 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ttttgtaatgggagagaaggaatgtggagctattgagagaaagagcatctataagaagtc 289
Query: 241 aaagccagttgctgctatactcctggtcaccaaaaccatgtaagagtacttcgtggggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 aaagccagttgctgctatactcctggtcaccaaaaccatgtaagagtacttcgtggggtg 229
Query: 301 gtgaggcaggagtgggtatggtgggaggg 329
||||||| ||||||||| ||||||||||
Sbjct: 228 gtgaggcgggagtgggtg-ggtgggaggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 728
Length adjustment: 9
Effective length of query: 320
Effective length of database: 719
Effective search space: 230080
Effective search space used: 230080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
