TTGGAGGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTGTTATGTACTTAAATCTTAATGCAGTATAATGACAA
ATTAAATGTGAATTAAACCATTAAGTGAGAGGAAATTTCCATTTTCCCTA
CTTAATGAGAAGCAACATTTTTTAGCAGTTCCTTCCTCTTATTAAGTAGG
AAAACCATTGAGAAGTTCTCAGTAAAAGGTCACATTGAAGACTAGAAAAC
CAATATATTTTCTAAAATCAAAACAGATTGGTGCCTCCCTGGTAGATTTT
CAGATGAAATAGTTGCCATGAAGGTCTGTGTAATACTGCACTGAGAATAA
GGGTGTTGAAGTAATAGGGCTATGCTTCATGCCAGCCATGTCTTACTGTC
CAGGTCTTGCCTAATGGGGTTTTATGCTCAGTTACTGAAATAGTGGGAAA
AACTTGCAGTAATAATTGGATTGTTCTCTCTGCCTTTTTTTTTATCTTTA
TCTTTTTTGTTTGCTTCCTTTTCCTTCCAATGCAGTTGAATCTGTTAAAT
TTTAAGTGTGAATCAAGTGACTGCACTTTTCTACACAATTTATTGATACC
CTTGTTGACTAGTCTTGCAATGATGAGAAAAACATTTATTGTTCTTGTTT
GACTTAGTCTCTTAAACAATTTAAAACCATTATTTTTGCTTTGCTTGTTC
AGAAATGAGGAAATGGAGAATAAAATAAGAAGTAAAATG

AAAAAACCAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAAACACCAAAGAGAA
CCCACAAATCAACTAACCTGGGCTCAGAGGGGTTCACAGAGACTGAACAA
CCATTCAGGGAGCCTGCATAGGTCTGACCTAGGTCCTCTGCATATCTGCT
ATGGTTGTGTACCTTGAACTTCACATGGGACTCATCACCGTGGGGATGGG
TGTTCTCTCTGACACTTTTGACTGATTTTGGAATCCTTTCCCACCTACTG
GGTTGCCTTGTCCTCCAGCTTTAATGTGAGGGTGGTGCTACTTACTGCAA
TACATGCCATGTTGTTCAACAGAGGCTCTTTCCTCAGAATAAATGGAGGA
GGAGTAGATGGGGTGATACTGGAGTAGATGGGGTGATACTGGAGTAGATG
GTGTTTTTTTTTTTTTTGTGTGTTTTTTTTTGTTTGTTTTTGGTTTTTGT
TTTTTTTTTTGTTTTTTGGTGGTTTTTTTTTTGCTTTTTTTTTTTNTGTG
GTTTTTTTGTTTTGTTGTTTTGTGTTTCTTGTTTTTTTTGTGGTGGTTTT
TTTGGTTTGTGTTTTTTTTTCTTATCCTCTCTCTTCTCTTTTCCTTTTCT
TTTGCCTTCGAATTTTAAGCGGGCGCGGTGTAGTATAATATTTTTATTTC
CTTGCCCGATCCGCATTTTTAATTTACCCGCTATCCATCCCTTTAAATTT
CCCCGCCCCCTCCACTCTCTTTTCTCTG

Query= MSMg01no504_g03.b1 MSMg01no504_g03.b1 CHROMAT_FILE:
MSMg01no504_g03.b1 PHD_FILE: MSMg01no504_g03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:58 2005
         (554 letters)



>mm_chr3_147126203_147127155
          Length = 953

 Score = 1040 bits (538), Expect = 0.0
 Identities = 547/550 (99%), Gaps = 1/550 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgttatgtacttaaatcttaatgcagtataatgacaaattaaatgtgaattaaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgttatgtacttaaatcttaatgcagtataatgacaaattaaatgtgaattaaa 264

                                                                       
Query: 65  ccattaagtgagaggaaatttccattttccctacttaatgagaagcaacattttttagca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccattaagtgagaggaaatttccattttccctacttaatgagaagcaacattttttagca 324

                                                                       
Query: 125 gttccttcctcttattaagtaggaaaaccattgagaagttctcagtaaaaggtcacattg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gttccttcctcttattaagtaggaaaaccattgagaagttctcagtaaaaggtcacattg 384

                                                                       
Query: 185 aagactagaaaaccaatatattttctaaaatcaaaacagattggtgcctccctggtagat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagactagaaaaccaatatattttctaaaatcaaaacagattggtgcctccctggtagat 444

                                                                       
Query: 245 tttcagatgaaatagttgccatgaaggtctgtgtaatactgcactgagaataagggtgtt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttcagatgaaatagttgccatgaaggtctgtgtaatactgcactgagaataagggtgtt 504

                                                                       
Query: 305 gaagtaatagggctatgcttcatgccagccatgtcttactgtccaggtcttgcctaatgg 364
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 505 gaagtaatagggctatgcttcatgccagccatgtcttactgtccaggtattgcctaatgg 564

                                                                       
Query: 365 ggttttatgctcagttactgaaatagtgggaaaaacttgcagtaataattggattgttct 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 565 ggttttatgctcagttactgaaatagtgggaaaaacttgcagtaataattgaattgttct 624

                                                                       
Query: 425 ctctgcctttttttttatctttatcttttttgtttgcttccttttccttccaatgcagtt 484
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctctgcctttttttt-atctttatcttttttgtttgcttccttttccttccaatgcagtt 683

                                                                       
Query: 485 gaatctgttaaattttaagtgtgaatcaagtgactgcacttttctacacaatttattgat 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gaatctgttaaattttaagtgtgaatcaagtgactgcacttttctacacaatttattgat 743

                     
Query: 545 acccttgttg 554
           ||||||||||
Sbjct: 744 acccttgttg 753


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 953
Length adjustment: 10
Effective length of query: 544
Effective length of database: 943
Effective search space:   512992
Effective search space used:   512992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)