NAAAAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCACCTTACCAACGTTCTGTTCATTTAGACAGTTAACA
TATCAGCCAAAGCTACGTCTTAACTAATAAAACTGGCTTAATTAAACATT
CTATTAGAAGTGGGAGAAATCACTGGAAAGACTGCTGTGAAAAGACTCAT
TGTCATACTGTTTCCCTTTCTTTGCAATGAGTATAAAACCTAGGAAACTG
AGAACACCATCATTCGCTTCCATTTAAACTTTCACAACTTTCAAAGGAAA
GTGGTTATAAAAATGTACATGCCTGCACACAAGGAAATTTACTGAACTTG
ATAACGTTTCAGCCTTAACCTCACATAAGTGGAGCAATGAAGAGCTCAGT
ATATAAAAGCAGCATGTATTTTTTGTGCCCTCTATTTTTGTACTCTTTTT
CTAAGGTGACCCCAGGATTTGTAGAAAATAGGGATGTTTTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTTTCTCCCTTCCCATTCCCCTTCCCCTCCTTCCTCCCTT
CCTCCCTTCCTTCCTTCCTTCCCTCCCTCCCTCCTCCTCCTCCTTCTTCT
TCTCCTTCTCCTTCTTCTCCTCCTCCTTCTCCTTCTCCTCCTCTCCTCCT
CCTTCTTTTAGGTTTCTTTACCTGTATTTTAG

NGGGGAACAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTACTACAAGGC
AATAGTTAAAACCAACAAACAAACAAAAACCTGCATTGTTTTGGTATAGA
AACAGACAGGTTGATCAATGGAATCAAAACAAAGACCCAGAAATAAACAC
ACACACACTTGAATTTGACAAAGAAACCAAGACATACAATGGAAAAGGGA
GAACATCTTCAATAAATGGTGCTGGTCTAACCGGATGTCTGCATGTAGAA
GAATGCAAATAGGTCCATACTTGTCACCCTGCACAAAACTCAAGTCCAAC
TGGATCAAAGACCTCAATATAAAGCCAGATACACTAAATCTAATAGAACA
GAAAGTGGATAATAGCCTTAAACTCATCAGTATAGGAGACAACTTCCTGA
ACTTAATACCAATATCTCAGGCATTGAGATAAATCATTAATAAGTGGGAC
CACATGAAATTGAAAAGCTTCTTTAAGTTAAAGGATAAAAGTTAATAGGA
CAAAAGTGACAGCTTACAGATTGGGAAAAGATCTTCACTAACCCTACATC
TGATAGAGGACTAACATCCAATATATATAAATAAGTCAAGATGTTAGACC
CCAACAAACCAAATAACGTAACTTTAAAAAATGGGAATAGTTTTATCTGA
AGACCCAGCTATACTACACCTGGGCATACACCCAAAAGATTCTCTN

Query= MSMg01no504_m01.b1 MSMg01no504_m01.b1 CHROMAT_FILE:
MSMg01no504_m01.b1 PHD_FILE: MSMg01no504_m01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:27 2005
         (627 letters)



>mm_chr3_56001312_56002338
          Length = 1027

 Score = 1096 bits (567), Expect = 0.0
 Identities = 609/635 (95%), Gaps = 22/635 (3%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccaccttaccaacgttctgttcatttagacagttaacatatcagccaaagctacg 64
           |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaccttagaaacgttctgttcatttagacagttaacatatcagccaaagctacg 264

                                                                       
Query: 65  tcttaactaataaaactggcttaattaaacattctattagaagtgggagaaatcactgga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcttaactaataaaactggcttaattaaacattctattagaagtgggagaaatcactgga 324

                                                                       
Query: 125 aagactgctgtgaaaagactcattgtcatactgtttccctttctttgcaatgagtataaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aagactgctgtgaaaagactcattgtcatactgtttccctttctttgcaatgagtataaa 384

                                                                       
Query: 185 acctaggaaactgagaacaccatcattcgcttccatttaaactttcacaactttcaaagg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acctaggaaactgagaacaccatcattcgcttccatttaaactttcacaactttcaaagg 444

                                                                       
Query: 245 aaagtggttataaaaatgtacatgcctgcacacaaggaaatttactgaacttgataacgt 304
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaagtggttataaaaatgtatatgcctgcacacaaggaaatttactgaacttgataacgt 504

                                                                       
Query: 305 ttcagccttaacctcacataagtggagcaatgaagagctcagtatataaaagcagcatgt 364
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 505 ttcagccttaacctcacataagtggagcaatgaagagctcagtatataaaagcagcctgt 564

                                                                       
Query: 365 attttttgtgccctctatttttgtactctttttctaaggtgaccccaggatttgtagaaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 attttttgtgccctctatttttgtactctttttctaaggtgaccccaggatttgtagaaa 624

                                                                       
Query: 425 atagggatgttttctctctctctctctctctctctctctctctctctctctctctctctc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atagggatgttttctctctctctctctctctctctctctctctctctctctctctctctc 684

                                                                       
Query: 485 tctctctctctctctctctctctctttctcccttcccattccccttcccctccttcctcc 544
           ||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tctctctctctctctct-t---tctttctcccttcccattccccttcccctccttcctcc 740

                                                                       
Query: 545 cttcctcccttcct------------tccttccttccctccctccctcctcctcctcctt 592
           ||||||||||||||            ||||||||||||||||||||||||||||||||||
Sbjct: 741 cttcctcccttcctcccttccttccttccttccttccctccctccctcctcctcctcctt 800

                                              
Query: 593 cttcttctccttctccttcttctcctcctccttct 627
           ||||||||||||||      |||||||||||||||
Sbjct: 801 cttcttctccttct------tctcctcctccttct 829


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 131
Number of extensions: 43
Number of successful extensions: 43
Number of sequences better than 10.0: 1
Number of HSP's gapped: 37
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space:   627489
Effective search space used:   627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)