NCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTAATTTCTGGACCAATGTATTTAAGGCTCATTTGTATTCTCTA
TAGCCAACACTAAAGTACAGCTATCACTGTAAGGAGGCATTTACAAACAT
TGGAACTCACTCAAATCCTAACAGGTAGGCCCTTCTAATACCCCATTCGT
TTTTAAGTCAAAATACATCAGCCTGTTCAATTTAGCAACATCCCTTAAGT
CTTTTAGTGACAAAACAAGGACCTAATCATCTTCGACCCAGGAGATGCTC
TGATCATTTAATAAATTCATTAATATGACTCTTACTGAAGGGAAAGCATG
AACAGTGTTAATAAGAGTTGAACTGATGTGAATAACAACCACATAGGCTT
GTGTAGGTTAGAGGTTCCACATTTGGAGTATTAATGTTTTTAACAAATAC
ATGTTTTTCTAAACAAAACCATTTAAATGACTAGTCTGAGACATAAAATG
CAGCTAATTATATAACAAAAATGTGGTAGGTAGCTACTATTTAAAATATC
CCTGTTAATAACTATTCATTAGTATTCAGAGCCTGTCAAAGGAGGACTGC
ATTAACCAGATATTCTTTCTAGACACATTTTGTTTACTATTAATTTGTAG
ACCAGGGAGTGAAAATAAATTACTGGAAGGCAAATGCCTTCCCACTTGTA
TGCTTTGGGCTGTTGCTATGTGTGCACTTTTCATCAGCATAATAGAACGT
ATTAATAGGCTTGCTTTTTTGC

ACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCCCCGTGGCATGGCTCGAAAACG
AACAGCAGAAGGATTTGGTAGCTTCAATAAAACATCAGCCACATCTTCTG
ATAGTCTAGCAATTACCGATCCGACCCTCTGCTCCTCATAAATCCTGTAT
TTCAGATTCTTAGCCAGGACATCGTGGCTGAAAAACGCCATCAGAAGTGC
AAGTGCAAATCTAAAGTGCATTTTAGTATTCATTTGGTGCATTGGTCAGT
TGCTAGATTCCCTTCTCAGGGCGAGTTAGAAGAGCCCAGCAATCCCTTCA
ACTTCCTCCCAGCCACTCAGAGCTCTAAGCCACATCGGGTCTCAGAGTCT
TGAAAGCGACTCTTAATCACACAGCAATTAAACAGCTCGCAAACTTCAGT
TTTCATACACACCGTTTGGCGACTTCCAGATAGGAGCGTGAAGTCCCTTC
CTGGTAGGGGTGGCCGCTGGTCCTCCTGGCTGGGAGCAGCGTGTCACCTC
GGCCTGGCTCCCCGCGTGGACTCCGTCCCCATCTATTGCAGGGTGCTGGC
GGAGTCTGCAGTCTGTGTTTCCCGGGCGATTCTTGATTTTCCCCCCTTTC
CTTTTCTCTGCTCCGCTGCAGACTAAACACCGGTGATTGCTGACTCCAGT
CTGAAAATCTCTACAACTTCACTTCAACTCAGACAAAGCTCTTTGCCTGG
CGTGTGGTGAATCGCTTCCN

Query= MSMg01no504_p17.b1 MSMg01no504_p17.b1 CHROMAT_FILE:
MSMg01no504_p17.b1 PHD_FILE: MSMg01no504_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:46 2005
         (611 letters)



>mm_chr3_49731582_49732592
          Length = 1011

 Score = 1166 bits (603), Expect = 0.0
 Identities = 609/611 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgtatttaaggctcatttgtattctctatagccaacactaaagtacagctatcactgta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 atgtatttaaggctcatttgtattctctatagccaacactaaagtacagctatcactgta 752

                                                                       
Query: 61  aggaggcatttacaaacattggaactcactcaaatcctaacaggtaggcccttctaatac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 aggaggcatttacaaacattggaactcactcaaatcctaacaggtaggcccttctaatac 692

                                                                       
Query: 121 cccattcgtttttaagtcaaaatacatcagcctgttcaatttagcaacatcccttaagtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 cccattcgtttttaagtcaaaatacatcagcctgttcaatttagcaacatcccttaagtc 632

                                                                       
Query: 181 ttttagtgacaaaacaaggacctaatcatcttcgacccaggagatgctctgatcatttaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ttttagtgacaaaacaaggacctaatcatcttcgacccaggagatgctctgatcatttaa 572

                                                                       
Query: 241 taaattcattaatatgactcttactgaagggaaagcatgaacagtgttaataagagttga 300
           ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 taaattcagcaatatgactcttactgaagggaaagcatgaacagtgttaataagagttga 512

                                                                       
Query: 301 actgatgtgaataacaaccacataggcttgtgtaggttagaggttccacatttggagtat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 actgatgtgaataacaaccacataggcttgtgtaggttagaggttccacatttggagtat 452

                                                                       
Query: 361 taatgtttttaacaaatacatgtttttctaaacaaaaccatttaaatgactagtctgaga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 taatgtttttaacaaatacatgtttttctaaacaaaaccatttaaatgactagtctgaga 392

                                                                       
Query: 421 cataaaatgcagctaattatataacaaaaatgtggtaggtagctactatttaaaatatcc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cataaaatgcagctaattatataacaaaaatgtggtaggtagctactatttaaaatatcc 332

                                                                       
Query: 481 ctgttaataactattcattagtattcagagcctgtcaaaggaggactgcattaaccagat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ctgttaataactattcattagtattcagagcctgtcaaaggaggactgcattaaccagat 272

                                                                       
Query: 541 attctttctagacacattttgtttactattaatttgtagaccagggagtgaaaataaatt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 attctttctagacacattttgtttactattaatttgtagaccagggagtgaaaataaatt 212

                      
Query: 601 actggaaggca 611
           |||||||||||
Sbjct: 211 actggaaggca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space:   601601
Effective search space used:   601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no504_p17.g1 MSMg01no504_p17.g1 CHROMAT_FILE:
MSMg01no504_p17.g1 PHD_FILE: MSMg01no504_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:47 2005
         (644 letters)



>mm_chr3_49560372_49561415
          Length = 1044

 Score = 1245 bits (644), Expect = 0.0
 Identities = 644/644 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccccgtggcatggctcgaaaacgaacagcagaaggatttggtagcttcaataaaacatca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccccgtggcatggctcgaaaacgaacagcagaaggatttggtagcttcaataaaacatca 260

                                                                       
Query: 61  gccacatcttctgatagtctagcaattaccgatccgaccctctgctcctcataaatcctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccacatcttctgatagtctagcaattaccgatccgaccctctgctcctcataaatcctg 320

                                                                       
Query: 121 tatttcagattcttagccaggacatcgtggctgaaaaacgccatcagaagtgcaagtgca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatttcagattcttagccaggacatcgtggctgaaaaacgccatcagaagtgcaagtgca 380

                                                                       
Query: 181 aatctaaagtgcattttagtattcatttggtgcattggtcagttgctagattcccttctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatctaaagtgcattttagtattcatttggtgcattggtcagttgctagattcccttctc 440

                                                                       
Query: 241 agggcgagttagaagagcccagcaatcccttcaacttcctcccagccactcagagctcta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agggcgagttagaagagcccagcaatcccttcaacttcctcccagccactcagagctcta 500

                                                                       
Query: 301 agccacatcgggtctcagagtcttgaaagcgactcttaatcacacagcaattaaacagct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agccacatcgggtctcagagtcttgaaagcgactcttaatcacacagcaattaaacagct 560

                                                                       
Query: 361 cgcaaacttcagttttcatacacaccgtttggcgacttccagataggagcgtgaagtccc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgcaaacttcagttttcatacacaccgtttggcgacttccagataggagcgtgaagtccc 620

                                                                       
Query: 421 ttcctggtaggggtggccgctggtcctcctggctgggagcagcgtgtcacctcggcctgg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcctggtaggggtggccgctggtcctcctggctgggagcagcgtgtcacctcggcctgg 680

                                                                       
Query: 481 ctccccgcgtggactccgtccccatctattgcagggtgctggcggagtctgcagtctgtg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctccccgcgtggactccgtccccatctattgcagggtgctggcggagtctgcagtctgtg 740

                                                                       
Query: 541 tttcccgggcgattcttgattttcccccctttccttttctctgctccgctgcagactaaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttcccgggcgattcttgattttcccccctttccttttctctgctccgctgcagactaaa 800

                                                       
Query: 601 caccggtgattgctgactccagtctgaaaatctctacaacttca 644
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 caccggtgattgctgactccagtctgaaaatctctacaacttca 844


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space:   655556
Effective search space used:   655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)