ACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAATAGATGATCCGCG
GAATTCCTGATTCTCCAGAACTTTTATCATGAATGGGTGTTGGATCTTGT
CAAATGCTTTTTCTGCATCCAACGAGATGATCATGTGGTTTTTGTCTTTG
AGTTTGTTTATATAGTGGATTACATTGATGGATTTTCGTATATTAAACCA
TCCCTGCATTCCTGGAATAAAACCTACTTGGTCAGGATGGATGATTGCTT
TAATGTGATCTTGGATTCGGTTAGCGAGAATTTTATTGAGGATTTTTGCA
TCGATATTCATAAGATATATTGGTCTGAAGTTCTCTATCTTTGTTGGATC
TTTCTGTGGTTTAGGTATCAGAGTAATAGTGGCTTCATAAAATGAGTTGG
GTAGCGTACTTTCTACTTCTATCTTGTGAAAAAGTTTGTGCAGAACTGGA
ATTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCACTAAACCCGTCTGG
TCCTGGGCTTTTTTGGCTGGGAGACTATTTATAACTGCTTCTATTTCTTT
AGGGGATATGGGACTGTTTAGAAGGTCAACTTGATCCTGATTCAACTTTG
GTACCTGGTATCTGTCCAGAAATTTGTCCATTTCGTCCAGGTTTTCCAGT
TTTGTTGAGTATAGCCTTTTGTAGAAGGATCTGATGGTGTTTTGGATTTC
TTCAGGATCTGTTGTTATGTCTCCCTTTTCAGNTCTGATTTTGTTAATAG
GATTTTGTCTCTGTGCCTCN

NNCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATCTTTGAACAACTAGAAT
GTTTTGACTTACCTTGATAGAATTCCCATGGGTGGGAATAATTGTCAGCG
AGGTCTTGGATTTTCAGCCTTGTTGAGAACAGGCACAATCAGAGCCGCTT
GTCAAATGTGCATTCTCAGTGCCATTTTCAATAATGTGACTCAATAGATC
TGGGTGGGGCTCAAAACCCTAGTGATAATAAGGACCCAGGATGGATTTGA
AGAAGGTACTTCACTGACCATTCTTTTGGAAATATGACTGGAAGGTCTTA
TTCTTAAGCAGTGTGTTTAGTTCTGCTCTTTGGCCTTGCTCCGTGATTTG
ACCTTCAATAGGTAACTGGAACCATTCCTAGAAACTGGCCAATCTGTGAA
CAGCCTGCTGCTGTCGACCTGTGGTGCTCGCTCGGTGTAGATGCTAGACT
TACTAATGTAATCCCCTCTGTTCGCCTTGCTATTCTACTCTAAATGAGGG
GTATTGGGGGAATTAGGATAATTAGCATGCAGGCCCGTTCTGCAGGCTTC
TTCTCTGCTCTCATCAATCACTGACGTTCTTATTCCTGTCTACCAAGGAG
GCTTGAAAAGTTACACAGCAGGCAGGGGGCAAAATTAATTGCTGTCTAGA
TTTTTCTTAAAGGGGGTTTCTCTCCTTTTTTCTCAGNATCTTTTTTTAAA
AATATAATTTGGGATGAAAG

Query= MSMg01no505_g15.g1 MSMg01no505_g15.g1 CHROMAT_FILE:
MSMg01no505_g15.g1 PHD_FILE: MSMg01no505_g15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:19 2005
         (598 letters)



>mm_chr3_50946092_50947095
          Length = 1004

 Score = 1056 bits (546), Expect = 0.0
 Identities = 587/604 (97%), Gaps = 6/604 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatctttgaacaactagaatgttttgacttaccttgatagaattcccatgggtgggaata 60
           ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 804 aatctttgaacaactagaacgttttgacttaccttgatagaattcctatgggtgggaata 745

                                                                       
Query: 61  attgtcagcgaggtcttggattttcagccttgttgagaacaggcacaatcagagccgctt 120
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 attgtcagcaaggtcttggattttcagccttgttgagaacaggcacaatcagagccgctt 685

                                                                       
Query: 121 gtcaaatgtgcattctcagtgccattttcaataatgtgactcaatagatctgggtggggc 180
           |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 684 gtcaaatgcgcattctcagtgccattttcaataatgtgactcaatagatctgggcggggc 625

                                                                       
Query: 181 tcaaaaccctagtgataataaggacccaggatggatttgaagaaggtacttcactgacca 240
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 624 tcaaaaccctagtgataataaggacccaggatggatttgaagaaggaacttcactgacca 565

                                                                       
Query: 241 ttcttttggaaatatgactggaaggtcttattcttaagcagtgtgtttagttctgctctt 300
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cacttttggaaatgtgactggaaggtcttattcttaagcagtgtgtttagttctgctctt 505

                                                                       
Query: 301 tggccttgctccgtgatttgaccttcaataggtaactggaaccattcctagaaactggcc 360
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 504 tggccttgctccgtgatttgaccttcaataggttactggaaccattcctagaaactggcc 445

                                                                       
Query: 361 aatctgtga------acagcctgctgctgtcgacctgtggtgctcgctcggtgtagatgc 414
           |||||||||      |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aatctgtgaacagctacagcctgctgctgtcgacctgtggtgctcgctcggtgtagatgc 385

                                                                       
Query: 415 tagacttactaatgtaatcccctctgttcgccttgctattctactctaaatgaggggtat 474
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 384 tagacttactaatgtaatcccctctgttcgccttgctattctgctctaaatgaggggtat 325

                                                                       
Query: 475 tgggggaattaggataattagcatgcaggcccgttctgcaggcttcttctctgctctcat 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgggggaattaggataattagcatgcaggcccgttctgcaggcttcttctctgctctcat 265

                                                                       
Query: 535 caatcactgacgttcttattcctgtctaccaaggaggcttgaaaagttacacagcaggca 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caatcactgacgttcttattcctgtctaccaaggaggcttgaaaagttacacagcaggca 205

               
Query: 595 gggg 598
           ||||
Sbjct: 204 gggg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 1004
Length adjustment: 10
Effective length of query: 588
Effective length of database: 994
Effective search space:   584472
Effective search space used:   584472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)