Query= MSMg01no505_h08.b1 MSMg01no505_h08.b1 CHROMAT_FILE:
MSMg01no505_h08.b1 PHD_FILE: MSMg01no505_h08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:22 2005
(627 letters)
>mm_chr3_28922688_28923714
Length = 1027
Score = 816 bits (422), Expect = 0.0
Identities = 425/426 (99%)
Strand = Plus / Minus
Query: 202 gttttgtgtcgatgtgccttggtggatgtcttcgcctagcttttttgcttttcttctgta 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 gttttgtgtcgatgtgccttggtggatgtcttcgcctagcttttttgcttttcttctgta 968
Query: 262 ttataagactggtgctcattttgagaaattacattcagatacacactctttctgtgcctg 321
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 967 ttataagactggtgctcattttgagaaattacattcagatacacagtctttctgtgcctg 908
Query: 322 tatctgtttgtcacccttcaagtcaactccttgctctcctgtaaccccgaggtttcctgc 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 tatctgtttgtcacccttcaagtcaactccttgctctcctgtaaccccgaggtttcctgc 848
Query: 382 agattggggacctgactgaggttcctctgcagcaaggttgtttcatgcacttgtagaatt 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 agattggggacctgactgaggttcctctgcagcaaggttgtttcatgcacttgtagaatt 788
Query: 442 taggtcgtttctacggctaggttctgggtagaactcactttccctgaccgatgatactga 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 taggtcgtttctacggctaggttctgggtagaactcactttccctgaccgatgatactga 728
Query: 502 aagactccaagatgttagacttgtattactctttgataaacagttttaaagcaccttcct 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 aagactccaagatgttagacttgtattactctttgataaacagttttaaagcaccttcct 668
Query: 562 atcattgtagaggaaaaaaatttcccctagagacaaagaatattactagcatgaaagctg 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 atcattgtagaggaaaaaaatttcccctagagacaaagaatattactagcatgaaagctg 608
Query: 622 gaaggt 627
||||||
Sbjct: 607 gaaggt 602
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_h08.g1 MSMg01no505_h08.g1 CHROMAT_FILE:
MSMg01no505_h08.g1 PHD_FILE: MSMg01no505_h08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:23 2005
(557 letters)
>mm_chr3_28737603_28738558
Length = 956
Score = 1015 bits (525), Expect = 0.0
Identities = 549/557 (98%), Gaps = 1/557 (0%)
Strand = Plus / Plus
Query: 1 attctctgagttactaatctgaacttaaactggttttatttattatgttagtttatttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctctgagttactaatctgaacttaaactggttttatttattatgttagtttatttat 260
Query: 61 ctattttttatttatacatttatttgtgtgagtatgcatgggcatgtatatatacatgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctattttttatttatacatttatttgtgtgagtatgcatgggcatgtatatatacatgta 320
Query: 121 tatcccatgtgtggagatcagaagacaacttttaagaattaatcagttctctccttctat 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 tatcccatgtgtggagatcagaagacaacttttaggaattaatcagttctctccttctat 380
Query: 181 cctgtgggttcccagggttgatctcaggttctcagtcttggaagcatgcacctttaccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctgtgggttcccagggttgatctcaggttctcagtcttggaagcatgcacctttaccct 440
Query: 241 ctgatccatttcactggccccagttgtttattaataatagaaagttgatctctttgatga 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgagccatttcactggccccagttgtttattaataatagaaagttgatctctttgatga 500
Query: 301 tggatgttaaaaaaatattggaaatactatagactccctagtgccagagaataattttta 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 tggatgttaaaaaaatattggaaatactgtagactccctagtgccagagaataattttta 560
Query: 361 tacttaaggttcatttaatcttttcatcaatataatcatttgaaaacagctaaggggaaa 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 561 tacttaaggttcatttaatcttttcatcaatataatcatttgaaaacagctaaggg-aaa 619
Query: 421 cacctcaggtcagtgcagggaagagggtgtcaagtttcgctgaagccaagaaaagccttt 480
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 620 catctcaggtcagtgcagggaagagggtgtcaagtttagctgaagccaagaaaagccttt 679
Query: 481 cttgccttcctcagctctggggcttggaggttctcttcttaggggtccaggaccccttga 540
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cttaccttcctcaactctggggcttggaggttctcttcttaggggtccaggaccccttga 739
Query: 541 agttggatgatacatgt 557
|||||||||||||||||
Sbjct: 740 agttggatgatacatgt 756
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 956
Length adjustment: 10
Effective length of query: 547
Effective length of database: 946
Effective search space: 517462
Effective search space used: 517462
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
