Query= MSMg01no505_n18.b1 MSMg01no505_n18.b1 CHROMAT_FILE:
MSMg01no505_n18.b1 PHD_FILE: MSMg01no505_n18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:52 2005
(688 letters)
>mm_chr3_72646277_72647364
Length = 1088
Score = 1299 bits (672), Expect = 0.0
Identities = 682/686 (99%), Gaps = 2/686 (0%)
Strand = Plus / Plus
Query: 5 gaattcacggattgctgttggcactaggggcaaaagatggtccttaccactccaatcatc 64
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacggagagctgttggcactaggggcaaaagatggtccttaccactccaatcatc 264
Query: 65 tggctgccaaggactcctaaatcacgttcgacatcaatgaagtgcccctgtgcgcgacac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tggctgccaaggactcctaaatcacgttcgacatcaatgaagtgcccctgtgcgcgacac 324
Query: 125 tccatttcctggcccacaactctgcctgaattcccagcgtccactctggcactagagacc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tccatttcctggcccacaactctgcctgaattcccagcgtccactctggcactagagacc 384
Query: 185 acagatcatgctgcgactagggaacccagaggcaaggttagtaccccaaaacctcagagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acagatcatgctgcgactagggaacccagaggcaaggttagtaccccaaaacctcagagt 444
Query: 245 cctcctaagccacaaataccccagaagttatagccaactaatctggaagactggctggtc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cctcctaagccacaaataccccagaagttatagccaactaatctggaagactggctggtc 504
Query: 305 accagaacctcaggcactaaagtcaaaagacagagaggaaacaaatataaacccaaataa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 accagaacctcaggcactaaagtcaaaagacagagaggaaacaaatataaacccaaataa 564
Query: 365 aatctcaaaaacacctcctgttgctggaaatattaatactgcagtcttcctgcagtactg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aatctcaaaaacacctcctgttgctggaaatattaatactgcagtcttcctgcagtactg 624
Query: 425 ccaataactatctgtctcagtgctgtcccactgggctactctctagctagcccccacagc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ccaataactatctgtctcagtgctgtcccactgggctactctctagctagcccccacagc 684
Query: 485 gactgatctatccctgtgttgccagctctggtttgcttgtctctggagtctctatttctt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gactgatctatccctgtgttgccagctctggtttgcttgtctctggagtctctatttctt 744
Query: 545 tctcatcccctgtagtcagcagttccacattctagtaaccaagtaaatcaaactcttttt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tctcatcccctgtagtcagcagttccacattctagtaaccaagtaaatcaaactcttttt 804
Query: 605 tttt--attagatattttcttcattacatttcaaatgctatcccctttcctagtttcctc 662
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ttttttattagatattttcttcattacatttcaaatgctatcccctttcctagtttcctc 864
Query: 663 tctgaaagttccctatatccccaccc 688
||||||||||||||||||||||||||
Sbjct: 865 tctgaaagttccctatatccccaccc 890
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1088
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1078
Effective search space: 730884
Effective search space used: 730884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_n18.g1 MSMg01no505_n18.g1 CHROMAT_FILE:
MSMg01no505_n18.g1 PHD_FILE: MSMg01no505_n18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:52 2005
(666 letters)
>mm_chr3_72809294_72810359
Length = 1066
Score = 650 bits (336), Expect = 0.0
Identities = 348/352 (98%)
Strand = Plus / Minus
Query: 1 agataggaggggaggtgggtataaataaatacttattcagctttatgtggtttggtattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 agataggaggggaggtgggtataaataaatacttattcagctttatgtggtttggtattt 293
Query: 61 acctagattgaattaaattctgttcagagcatatttatttcatttataacaatcatgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 acctagattgaattaaattctgttcagagcatatttatttcatttataacaatcatgata 233
Query: 121 attttaaagataactataatcacttataaataggctgtagagatgttttagtagataaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 attttaaagataactataatcacttataaataggctgtagagatgttttagtagataaga 173
Query: 181 gtatcctcttcttttccagaggacacaaattacattaccagcacctatgacagttggatg 240
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 172 gtatcctcttcctttccagaggacacaaatgacattaccagcacctatgacagttggatg 113
Query: 241 accattatctagaactccagctccaattgataaactattaatcttttacctctgctggca 300
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 accaacatctagaactccagctccaattgataaactattaatcttttacctctgctggca 53
Query: 301 cctaaaacttatatactgattatacgtatattcatacatatatagagagtaa 352
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 cctaaaacttatatactgattatacgtatattcatacatatatagagagtaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
