Query= MSMg01no506_o19.b1 MSMg01no506_o19.b1 CHROMAT_FILE:
MSMg01no506_o19.b1 PHD_FILE: MSMg01no506_o19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:17 2005
(658 letters)
>mm_chr3_26071756_26072813
Length = 1058
Score = 1195 bits (618), Expect = 0.0
Identities = 645/654 (98%)
Strand = Plus / Minus
Query: 5 gaattcagtgaattattccaatttccccactaattgtgaatacagatttaatccctcagt 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 gaattcagtgaattaaaccaatttccccactaattgtgaatacagatttaatccctcagt 799
Query: 65 atctccctgctattcaaactctatagcaaacagaaattattagagaactataatagaatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 atctccctgctattcaaactctatagcaaacagaaattattagagaactataatagaatt 739
Query: 125 ggagggattatatatttaaaaaattgtcctttaatgagtaagctataatgggatgatgga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ggagggattatatatttaaaaaattgtcctttaatgagtaagctataatgggatgatgga 679
Query: 185 agcctgttattaattcatagtctgatatcagatggctatttcatactacttctttagaat 244
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 agcctgttattaattcgtagtctgatatcagatggctatttcatactacttctttagaat 619
Query: 245 ttcaaataactctgaatagagcttgaaggtatccatcaaccatcatttgagtaaatgggt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ttcaaataactctgaatagagcttgaaggtatccatcaaccatcatttgagtaaatgggt 559
Query: 305 taaatgatccacagatttcacgcatctttgtgttgatggagaaagtctttgggatgaaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 taaatgatccacagatttcacgcatctttgtgttgatggagaaagtctttgggatgaaga 499
Query: 365 gcaagttgctgagtctaacttatctcttaatctttaattgttcctcattgtttttgaact 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ccaagttgctgagtctaacttatctcttaatctttaattgttcctcattgtttttgaact 439
Query: 425 ttatgaaccttaagttcaacagcattggacagactgtttaattatgtgagttattatggc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 438 ttatgaaccttaagttcaacagcattggacagactgtttaattatgtgagttagtatggc 379
Query: 485 atccctgtccgcaagacatcaaaatttttgtcgcagaagctatcacatcaatttagactt 544
|||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 378 atccctgtccgcaagacatcaacatttttgtcgtagaagctatcacatcaatttagactt 319
Query: 545 ttgtgtgtattgtcccccctaggctgcaaatcctttacacatcctatgacatatgcaatg 604
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ttgtgtgtattgtccctcctaggctgcaaatcctttacacatcctatgacatatgcaatg 259
Query: 605 tacttcaatatctctttactgccagcacagactagattgacatatacataaagt 658
|||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 258 tacttcaatatctctttactgctagcacagactagattgacatatacataaagt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no506_o19.g1 MSMg01no506_o19.g1 CHROMAT_FILE:
MSMg01no506_o19.g1 PHD_FILE: MSMg01no506_o19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:17 2005
(638 letters)
>mm_chr3_25912215_25913253
Length = 1039
Score = 1166 bits (603), Expect = 0.0
Identities = 634/653 (97%), Gaps = 15/653 (2%)
Strand = Plus / Plus
Query: 1 tctggtgctcaggatctaagctcctgtactgttcttggcttacctgggagttccctctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tctggtgctcaggatctaagctcctgtactgttcttggcttacctgggagttccctctgg 246
Query: 61 cagttttaaagcactattcataacagaaattaacttggagtactcagttatctggcttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 cagttttaaagcactattcataacagaaattaacttggagtactcagttatctggcttta 306
Query: 121 tagactacttctttaacaagcactcagtgaacatcctatcactgggtaatggagaggttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tagactacttctttaacaagcactcagtgaacatcctatcactgggtaatggagaggttg 366
Query: 181 cacagttgctgttagagatgcatacatgtatcacgtctgaaacactctcaactgagcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 367 cacagttgctgttagagatgcatacatgtatcacgtctgaaacactctcaattgagcttg 426
Query: 241 cattagaacgtaaagaatgtgaggcttctagtggtttcaatgagcactgctataactaat 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 427 cattagaacgtaaagaatgtgaggcttccagtggtttcaatgagcactgctataactaat 486
Query: 301 cattataatcaatgtaaagtttttatctgaatctaaggacattaaggtgctcaaaagaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 cattataatcaatgtaaagtttttatctgaatctaaggacattaaggtgctcaaaagaca 546
Query: 361 tgactttctaatatcgtagatccgagtctcaagtctatttgtattaatatttgcattca- 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tgactttctaatatcgtagatccgagtctcaagtctatttgtattaatatttgcattcat 606
Query: 420 -------------caattcattctctcattttcacaattcagcattgcctttatctttct 466
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tctctcattttcacaattcattctctcattttcacaattcagcattgcctttatctttct 666
Query: 467 cctttatgagtgtatcattaagccttcactcatttttaa-gaaaaatataaagtatatga 525
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 667 cctttatgagtgtatcattaagccttcactcatttttaaagaaaaatataaagtatgtga 726
Query: 526 agaataaattttgagaaataggtcatatatggaatcaagcattgcttcaggagttcatgc 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 agaataaattttgagaaataggtcatatatggaatcaagcattgcttcaggagttcatgc 786
Query: 586 tatctgtgggtggatatataatacgcttcattaaaaatgaactaagtcattta 638
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 787 tatctgtgggtggatatgtaatacgcttcattaaaaatgaactaagtcattta 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1039
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1029
Effective search space: 646212
Effective search space used: 646212
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
