NNNNCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTTAAACTATTCTCTAGTTCCTTGTATTCAAAGAAACAAA
ACTGTCTTAGCTTATTTATCCAGGTTTGTATAGTCTATAAAGGGGTCAAC
TTTAAAAAAGGCAAAAATCAAAGATTTAATACACAATTGTATTATTTTTT
TCTCAGAGTCAGGATCATTTAAATTTCTCTCTGAGTTGAAATCCTTTCAA
TGGTCATATTATATTTCTAGCTAAATAGGTATGTAGTTGCACCTGTGTAC
CTGATGGCTATGATGTGATACTGCTGTCAAATATTTGTGGAAGATCTTAA
ATTAACAGTGCCTGTATAACTATGATGCTATTTTCTTTGTCTGTGTTTGT
GATCCCCTGGGATATAACTCCTGTGATACATCTTCTAGAATGTAACTCAT
ATAAATGCTTACCAACCTGTTATCATCAAAACAAAGATGATCAATAATGA
CAATGTTTAAATATGTATGTTCCTAGTTACATTATGACCATTACTTTGGG
GGTACAAACAACTAAACTCACTCAAGCACATCCCATTCTAAGCAGGATGA
ATTTAACATGCTTCAACATTGGGCTTGCAGAGTCCTCTCATGTAATGCTG
TAGCCAATGGGACAATGAGACAGTTCATACATTCCTAGCCCTCTTGGGTT
TCGTTATTGTAACTTTCTTTTCAAGCTTTATAGCTTATCTCTTCATTTTC
TGTTACAAAAGAA

TTTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAGCGCCTGATAGCAAAGTAGCG
TCTCAGTTCCTATCACCCTGGGTCTGTGTCTCTCCTCCTTTGCTTTATTC
TTTCTAGTTTTAAAACACTGGCAAAGGTTCCAAAAGTGCATTTTCAAAAG
GGAAATCTCCACCAAGAGCTCAAATGGTGCCAATCAAGCTGAGAAACTGA
ATCCTTGGCACCGTGGAACAAGGTCCCCTTGTTTCACGTCTCCAGAGAGC
TGTTACAGTTCTCCGGAGTACATTCATTTGTACAATGCAGTGACCTCCAT
TTGTTCCCCTAGCTCTGCACTTGTAAGGTAATATTCACCCTAGCCTGCTC
GAGTCGATGCTGAGGGCCAAACTCTGTCATAGGCCATGGCATTATCAGCT
GCTGTTAAAGTGGCTTACGTGTTGGAGAATGGTGACCATTGGACTTTTCT
CTGCCTGTATCCCATTAGCAGCTCTGTGATCCAACTAACTCTAAAGATAA
AATGACTTGCTGTGCCCAGATCTGCTGCCTTAGATGCCTTTGAAATGAAG
CCCAGCCGAAGTTGTTTGTTATCTGTTAGGTCTGTGGGATTCTTCTTTGC
CAGTGTCATCCGGGCCCCCAGACCCTACGCACACCCTGCTGTTTGTCGTC
ACCTGTGCCTGTGGCTTTTGATATGGGAGGGTCTGTCTAGACACAATTTT
GAGATGTGTGCATTTGGTGT

Query= MSMg01no507_c18.g1 MSMg01no507_c18.g1 CHROMAT_FILE:
MSMg01no507_c18.g1 PHD_FILE: MSMg01no507_c18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:37 2005
         (529 letters)



>mm_chr3_66055464_66056392
          Length = 929

 Score = 1007 bits (521), Expect = 0.0
 Identities = 527/529 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agcgcctgatagcaaagtagcgtctcagttcctatcaccctgggtctgtgtctctcctcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 agcgcctgatagcaaagtagcgtctcagttcctatcaccctgggtctgtgtctctcctcc 670

                                                                       
Query: 61  tttgctttattctttctagttttaaaacactggcaaaggttccaaaagtgcattttcaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 tttgctttattctttctagttttaaaacactggcaaaggttccaaaagtgcattttcaaa 610

                                                                       
Query: 121 agggaaatctccaccaagagctcaaatggtgccaatcaagctgagaaactgaatccttgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 agggaaatctccaccaagagctcaaatggtgccaatcaagctgagaaactgaatccttgg 550

                                                                       
Query: 181 caccgtggaacaaggtccccttgtttcacgtctccagagagctgttacagttctccggag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 caccgtggaacaaggtccccttgtttcacgtctccagagagctgttacagttctccggag 490

                                                                       
Query: 241 tacattcatttgtacaatgcagtgacctccatttgttcccctagctctgcacttgtaagg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tacattcatttgtacaatgcagtgacctccatttgttcccctagctctgcacttgtaagg 430

                                                                       
Query: 301 taatattcaccctagcctgctcgagtcgatgctgagggccaaactctgtcataggccatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 429 taatattcaccctagcctgctcgagtcgatgctgagggccaaactctgtcataggccgtg 370

                                                                       
Query: 361 gcattatcagctgctgttaaagtggcttacgtgttggagaatggtgaccattggactttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gcattatcagctgctgttaaagtggcttacgtgttggagaatggtgaccattggactttt 310

                                                                       
Query: 421 ctctgcctgtatcccattagcagctctgtgatccaactaactctaaagataaaatgactt 480
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 309 ctctgcctgtatcccattagcaactctgtgatccaactaactctaaagataaaatgactt 250

                                                            
Query: 481 gctgtgcccagatctgctgccttagatgcctttgaaatgaagcccagcc 529
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gctgtgcccagatctgctgccttagatgcctttgaaatgaagcccagcc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space:   476961
Effective search space used:   476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)