CTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCACTGTAAGATCTTAATTAGACACACAGGCTAAAGCCAAAGCTGGGAA
TTATTACATGTGGTAAACAGGGTTAAAGAGGAACTTTGAAGCAAGATTTT
CTAAGAGATATTAATTAACAATGCAGAATTATTTAGGCTATTGTAGAATT
TTTTTAATTTAGGCTCAGGTATCTGATGCCTTCCAAACAGGTATCAAGAA
ACAAATTAAATTATTAGGAACCAACCTGTCATAAATCAGACAGATTCAAG
GTTTCTCTGAATTAATTTATAATGCTAATTTCTCACCATTTATATCTCAT
TGCCATAACTGCCACATTGCCAATAAAATGATGCAAACCCTCAAGACCTG
CAAACAGTCAACAGCCTCAGAGACAGGAGGGAAGCCTCTGGTGGATGACT
AATTAGCCAGTTCCACTTATCTCAGCTTTGACATTTCAGGAAAGTCCGCC
ATTCTGGCATTTGGAACTGGGGAATTCCGGTGTAACCAGAGTCACGTGAG
ACCCGGATTCTTTGAGCACAGCTGTGAAACCAGAACAAAATGCTGTGACA
TTAACATGCGAATTACAGGGAAAAGAGTTTCCCCATTAACTTCCTGGGTC
ATCATTGAAAGTTTAGACAGGCAGATATCTGATGGCAATTTAACTGTGCA
TGTGTTTGTANGATAGCATTAGTGTGAAAAGGAATCACCCCCCAACTGGA
TGTTCGACCCTGGACGACCCAGTGGGCACTGTTTCA

CGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAG
AAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAAT
CAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATAA
AAAATTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAAT
GGGGCTCAGAACTGAACAAAGAATTCTCACCTGAGGAATACCGAATGGCA
GAGAAGCACTTGAAAAAATGTTCAATATCCTTAATCATCAGGGAAATGCA
AATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGA
TCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGA
ACACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAA
ATCAGTCTGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATC
CAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGTAAG
AAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAG
AAGCTGGAAAGAACCTAGATGCCCCTCCACAGANGAATGGATACAGAAAA
TGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAA
TTTATGAAATTCCTAGCCCAATGGATGGACCTGGAGGGCATCATCTTGAG
TGAGGTAACACA

Query= MSMg01no509_g23.b1 MSMg01no509_g23.b1 CHROMAT_FILE:
MSMg01no509_g23.b1 PHD_FILE: MSMg01no509_g23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:40 2005
         (606 letters)



>mm_chr3_60615363_60616368
          Length = 1006

 Score = 1158 bits (599), Expect = 0.0
 Identities = 602/603 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcactgtaagatcttaattagacacacaggctaaagccaaagctgggaattatta 63
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactgtaagagcttaattagacacacaggctaaagccaaagctgggaattatta 263

                                                                       
Query: 64  catgtggtaaacagggttaaagaggaactttgaagcaagattttctaagagatattaatt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 catgtggtaaacagggttaaagaggaactttgaagcaagattttctaagagatattaatt 323

                                                                       
Query: 124 aacaatgcagaattatttaggctattgtagaatttttttaatttaggctcaggtatctga 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aacaatgcagaattatttaggctattgtagaatttttttaatttaggctcaggtatctga 383

                                                                       
Query: 184 tgccttccaaacaggtatcaagaaacaaattaaattattaggaaccaacctgtcataaat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgccttccaaacaggtatcaagaaacaaattaaattattaggaaccaacctgtcataaat 443

                                                                       
Query: 244 cagacagattcaaggtttctctgaattaatttataatgctaatttctcaccatttatatc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cagacagattcaaggtttctctgaattaatttataatgctaatttctcaccatttatatc 503

                                                                       
Query: 304 tcattgccataactgccacattgccaataaaatgatgcaaaccctcaagacctgcaaaca 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcattgccataactgccacattgccaataaaatgatgcaaaccctcaagacctgcaaaca 563

                                                                       
Query: 364 gtcaacagcctcagagacaggagggaagcctctggtggatgactaattagccagttccac 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtcaacagcctcagagacaggagggaagcctctggtggatgactaattagccagttccac 623

                                                                       
Query: 424 ttatctcagctttgacatttcaggaaagtccgccattctggcatttggaactggggaatt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttatctcagctttgacatttcaggaaagtccgccattctggcatttggaactggggaatt 683

                                                                       
Query: 484 ccggtgtaaccagagtcacgtgagacccggattctttgagcacagctgtgaaaccagaac 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ccggtgtaaccagagtcacgtgagacccggattctttgagcacagctgtgaaaccagaac 743

                                                                       
Query: 544 aaaatgctgtgacattaacatgcgaattacagggaaaagagtttccccattaacttcctg 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aaaatgctgtgacattaacatgcgaattacagggaaaagagtttccccattaacttcctg 803

              
Query: 604 ggt 606
           |||
Sbjct: 804 ggt 806


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space:   593616
Effective search space used:   593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)