CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTCAACAGATTTCTCTTGAATGTCTGCAATGCACATAAAGAAATGTTC
AAAGACCTTAGTCATCAGTGAAATGCAAATGAAAACTTGAGATTCGATCT
TACACTGGTCAGAGTGATTAAGATAAAAAACTCAAGTGATAGCACATGCA
TGAGAAGGATGTGGAGTAAGGAGAACACTCCATTGCTGGTGAGAATGCAA
ACTTGAATAACCAACTTGGAAATTAATATGGTGGTTTCTCAGGAAAACTT
GCAATAATTCTACTTGAAGGCCTAGCATCTGGGCATATATGCAAAAAGAT
ATTCTACCTTTCCACAAAGACACTTGTTCAACAATGTTTTGTAATAGCTA
GAAACTGGAAACAACCCAGATGTCTCTCAACTGAAAAATAGTTTAAAAAA
TGTGGTACACCTATATGATGGAATATTATTCACCTATTAAAAACAAAAAC
ATGAAATTTGTAGGCTAAAGAATAGATATTGAAAATATCATCCTGAGTGA
AGTAACCCAGTCCCTAAAGGACATTTATGTTATGTACTCAATTATAAGCG
GATATTAGCTGAGTAGTACTCCATTGTGTAAATGTACCACATTTTCAGTA
TCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCTGCTTCTGGCTACT
ATAAATAAGGCTGCTATGAGCATAGTGGAGCATGTGTCCTTCTTACCTGT
TGGAATATCCTCTGGAATATGCCCCACAGAAGTATTGCGGGATC

CGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTAATCTCATGTATTCATTATCTTT
AAAGAAATTTCAACTGTGCCCATCTGTGTTTCAGTGGTATTCATTAAATA
TCATATATTCAAACATAAGATTATTATTTATATATCTAAATCCAAATTAA
ACCCTCTTCAGATTTGTTTGTAACTTTGCTCAAGTCAACCAATACACCGA
ACATTAGTTTCCTAATTTCTTTTGAAAGTGGAAATAGCGTGACAAATACA
AGGTCACAGGGATTTATGTGGCATATGAGTAACTCTCTGTTGAGCTAGTC
ACTTGACTTGTATGCCTTAGTTATTGGTATTTCTTCTGATATATATATAA
ATAATATATGCGTAATAGACAATATAACATTATGTGCACATATATTTAAT
ATAGATTATATATACATATATTATAACTCATAAATGAGAGATGGTTGATA
AGAGAAATCAGAGAGGAAATCTGGCCAGAGATATTTTTATAGCAATTAAG
GAGTTACACAACAGGGAGAAAAATTATCATCTCCATATAACAAATTTCAA
CATTCAGAGAAGAAAATGAATAATTTGAGACTAAGGATTCAGAGCACAGG
ATGGAGATAATTAAATAGTCTCCAATTTTTTTTGGCTTATTTTGTAAAAA
TATAATTGGTAGGATCCAGGGAATTTGGGTTTCTGGCTAAATTGTTATCA
GTTTTATAGAAATGGTTTATTTATAAAATCTTTTATGGCATATAGCAAGA
TCCGTGAATCTCATGACATN

Query= MSMg01no509_h21.g1 MSMg01no509_h21.g1 CHROMAT_FILE:
MSMg01no509_h21.g1 PHD_FILE: MSMg01no509_h21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:44 2005
         (531 letters)



>mm_chr3_149578165_149579095
          Length = 931

 Score =  961 bits (497), Expect = 0.0
 Identities = 521/531 (98%), Gaps = 4/531 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttaatctcatgtattcattatctttaaagaaatttcaactgtgcccatctgtgtttcag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaatctcatgtattcattatctttaaagaaatttcaactgtgcccatctgtgtttcag 260

                                                                       
Query: 61  tggtattcattaaatatcatatattcaaacataagattattatttatatatctaaatcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtattcattaaatatcatatattcaaacataagattattatttatatatctaaatcca 320

                                                                       
Query: 121 aattaaaccctcttcagatttgtttgtaactttgctcaagtcaaccaatacaccgaacat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattaaaccctcttcagatttgtttgtaactttgctcaagtcaaccaatacaccgaacat 380

                                                                       
Query: 181 tagtttcctaatttcttttgaaagtggaaatagcgtgacaaatacaaggtcacagggatt 240
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 tagtttcctaatttcttttgaaagtggaaatagcatgacaaatacaaggtcacagggatt 440

                                                                       
Query: 241 tatgtggcatatgagtaactctctgttgagctagtcacttgacttgtatgccttagttat 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 tatgtggcatatgagtaactctctgttgagctagtcacttgacttgtatgccttggttat 500

                                                                       
Query: 301 tggtatttcttctgatatatatataaataatatatgcgtaatagacaatataacattatg 360
             |||||||||||||||||||    |||||||||||||||||||||||||||| ||||||
Sbjct: 501 cagtatttcttctgatatata----aataatatatgcgtaatagacaatataatattatg 556

                                                                       
Query: 361 tgcacatatatttaatatagattatatatacatatattataactcataaatgagagatgg 420
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tgcacatatatttaatatagactatatatacatatattataactcataaatgagagatgg 616

                                                                       
Query: 421 ttgataagagaaatcagagaggaaatctggccagagatatttttatagcaattaaggagt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ttgataagagaaatcagagaggaaatctggccagagatatttttatagcaattaaggagt 676

                                                              
Query: 481 tacacaacagggagaaaaattatcatctccatataacaaatttcaacattc 531
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tacacaacagggagaaaaattatcatctccatataacaaatttcaacattc 727


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space:   479841
Effective search space used:   479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)