TTTTAAACCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCTGATTTTCTCAGAACTTTTATCATGAATGGGTGTTGGA
TCTTGTCAAATGCTTTTTCTGCATCCAACGAGATGATCATGTGGTTTTTG
TCTTTGAGTTTGTTTATATAGTGGATTACATTGATGGATTTTTGTATATT
AAACCATCCCTGCATTCCTGGAATAAAACCTACTTGGTCGGGATGGATGA
TTGCTTTAATGTGATCTTGGATTCGGTTAGCGAGAATTTTATTGAGGATT
TTTGCATCGATATTCATAATATTAATTTGGTCTGAAGTTCTCTATCTTTG
TTGGATCTTTCTGTGGTTTAGGTATCAGAGTAATAGTGGCTTCATAAAAT
GAGTTGGGTAGAGTACTTTCTACTTCTATCTTGTGAAAAAGTTTGTGCAG
AACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCACTAAACC
CGTCTGGTCCTGGGCTTTTTTTGGCTGGGAGACTATTTATAACTGCTTCT
ATTTCTTTAGGGGATATGGGACTGTTTAGAAGGTCAACTTGATCCTGATT
CAACTTTGGTACCTGGTATCTGTCCAGAAATTTGTCCATTTCGTCCAGGT
TTTCCAGTTTTGTTGAGTATAGCCTTTTGTAGAAGGATCTGATGGTGTTT
TGGATTTCTTCAGGATCTGN

AGCTGGTCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTTGCACAAATGAAGTA
CAATGTGTTCCCCCTCAATCGATCTGATCCCTGAAACACTGACAAAGCAA
GAGTTCCATTTTTGCAAGTCTTGGGAAAGATTGATCTGAACAGTCCCATG
AAGGGCAATTTCATTTTCTGCCAGCGTATGACCTTTCCAGTGAAATTAAA
CTTGAGCCTCAGTTTTGAAGTGGTGGAATGCTTTTTATGAACATTTTGCA
GAGGGCAGCTGTGGAGGATATAAATTTTTTATATGACCCCAACAATCAAG
GCGAAGATGAATTTGAGGAAGCCGAGCAAGTGAGAGAAGAAAATTTGCCA
GAGGAAAGTGAAGAGCAAAAACAAAGCGAAGCAAAGCAAGGGAATGTAGA
AATGGATGAGCACTTGGTGGTAAGATAATGCCTGGGGTGAACAGTGGGTT
CAGCCTGACCATTTTAGGAAATGCCTAGTTTATGGGGAAGGCAAATGCTT
ATGTGAGTTAGAGAAGATTTGCCACATCAGCAAGTCTTGGACCCTTGGGG
ATGCTATGCTTGTAATCCCAGAGCCAGGTAAGGGATGACCCACGCTCCAC
ATTTGAGAAATGGATATTCAGCATTTTCTGGCTACTGATGCATTTGCGAG
TGCACTTTTCATCATGGTATTCTC

Query= MSMg01no510_a05.g1 MSMg01no510_a05.g1 CHROMAT_FILE:
MSMg01no510_a05.g1 PHD_FILE: MSMg01no510_a05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:28 2005
         (642 letters)



>mm_chr3_75690140_75691181
          Length = 1042

 Score = 1145 bits (592), Expect = 0.0
 Identities = 629/648 (97%), Gaps = 12/648 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   acttgcacaaatgaagtacaatgtgttccccctcaatcgatctgatccctgaaacactga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 acttgcacaaatgaagtacaatgtgttccccctcaatcgatctgatccctgaaacactga 783

                                                                       
Query: 61  caaagcaagagttccatttttgcaagtcttgggaaagattgatctgaacagtcccatgaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 caaagcaagagttccatttttgcaagtcttgggaaagattgatctgaacagtcccatgaa 723

                                                                       
Query: 121 gggcaatttcattttctgccagcgtatgacctttccagtgaaattaaacttgagcctcag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gggcaatttcattttctgccagcgtatgacctttccagtgaaattaaacttgagcctcag 663

                                                                       
Query: 181 ttttgaagtggtggaatgctttttatgaacattttgcagagggcagctgtggaggatata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ttttgaagtggtggaatgctttttatgaacattttgcagagggcagctgtggaggatata 603

                                                                       
Query: 241 aa------ttttttatatgaccccaacaatcaaggcgaagatgaatttgaggaagccgag 294
           ||            | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aacccagc------agatgaccccaacaatcaaggcgaagatgaatttgaggaagccgag 549

                                                                       
Query: 295 caagtgagagaagaaaatttgccagaggaaagtgaagagcaaaaacaaagcgaagcaaag 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 caagtgagagaagaaaatttgccagaggaaagtgaagagcaaaaacaaagcgaagcaaag 489

                                                                       
Query: 355 caagggaatgtagaaatggatgagcacttggtggtaagataatgcctggggtgaacagtg 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 caagggaatgtagaaatggatgagcacttggtggtaagataatgcctggggtgaacagtg 429

                                                                       
Query: 415 ggttcagcctgaccattttaggaaatgcctagtttatggggaaggcaaatgcttatgtga 474
           |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ggttcagcctggtcattttaggaaatgcctagtttatggggaaggcaaatgcttatgtga 369

                                                                       
Query: 475 gttagagaagatttgccacatcagcaagtcttggacccttggggatgctatgcttgtaat 534
           |||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||
Sbjct: 368 gttagagaagatttgccacatcagcaagtcttggaccctttgggatgttatgcttataat 309

                                                                       
Query: 535 cccagagccaggtaagggatgacccacgctccacatttgagaaatggatattcagcattt 594
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 308 cccagagccaggtaagggatgactcacgctccacatttgagaaatggatattcagcattt 249

                                                           
Query: 595 tctggctactgatgcatttgcgagtgcacttttcatcatggtattctc 642
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tctggctactgatgcatttgcgagtgcacttttcatcatggtattctc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space:   652224
Effective search space used:   652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)