CTCCATACTCTCTATAGTGTGTGGCTTCCGTTTAGTAGTGGTCTAAAAGC
CGAAAGTCCCCGTGGCGTTGTTCACTTCCCCGTTTCGGGCCCTCCGGGCC
GAAGCGGCGCATGCAAAGTGGGTGCGCGCCGGGGGTCCGGGGGGAGGCCG
GACAGTTGTCGGAGCTTTACGGAGTCTCGGTTTCCAATGGCGCTACACCA
TTAGACGCGATCAGTCATACTTCGCGCGCAGTGCATTCGCTCTCAGACTG
AATGCGCATCCCACAGACAGA

AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCTTCACTGACGCTGTATTTCTTAAAGTCCCACA
GCAACCGTGGGACTATGCTGTGTCCCACTGCTTATATCTTAAAAATCCTC
TTGACGCATTCTTTAACTATTGATTGGTCTAATTACGGTGTGGTTCTTAA
TTTATTGTAAACATGCACTCTGAACGTTTATCCCTCAGAAAGACTCCCCA
CTTATGGAGGCTCTCTTGTCATCTACATTCTCCAATAAGATAATCACTCA
CCTGTGGCTTTTTCAAGTCTAAATATATTGAGTTTAAAAGTTTTTAAACA
TGGCACTATTACTATTAAATTTTAAATTCATTCACAGTGCCTACATGTCT
AGTTTTTGGCAGGTACTTTGAGTGGTGTCTAACACATTAGCCAATGCAAG
CAGTTCTTCTACCTATTCAGAAATGTGTGTGGAAGGACTATAATCAATAG
TATTTTCATCGTCAGACATACTTTCTATGTATTCTTCCTCCTGTTAAATT
AAAAGTTGTTTAGTTGACCAAATCTGCCTATCAAATGTTCCTAATCCCAC
CTCTATACTTACTTTTTCTAAGGCATCTTGGCATTGATGTCAAGATTCTC
GAAGCTAGGACAAAATCAGCCACTGAGTAGTTGATTGAATCGCTGTGTGA
TGGGCAAAAATCTAAAGACTGATTGTTATAATCACATTTGAATTCTGAGA
TATATT

Query= MSMg01no512_n07.g1 MSMg01no512_n07.g1 CHROMAT_FILE:
MSMg01no512_n07.g1 PHD_FILE: MSMg01no512_n07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:07 2005
         (575 letters)



>mm_chr3_117034848_117035822
          Length = 975

 Score = 1052 bits (544), Expect = 0.0
 Identities = 568/576 (98%), Gaps = 2/576 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttcactgacgctgtatttcttaaagtcccacagcaaccgtgggactatgctgtgtccca 60
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 775 cttcactgacgctgtatttcttaaagtcccacagcaaccatgggactatgctgtgtccca 716

                                                                       
Query: 61  ctgcttatatcttaaaaatcctcttgacgcattctttaactattgattggtctaattacg 120
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ctgcttatatctt-aaaatcctcttgacgcattctttaactattgattggtctaattacg 657

                                                                       
Query: 121 gtgtggttcttaatttattgtaaacatgcactctgaacgtttatccctcagaaagactcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gtgtggttcttaatttattgtaaacatgcactctgaacgtttatccctcagaaagactcc 597

                                                                       
Query: 181 ccacttatggaggctctcttgtcatctacattctccaataagataatcactcacctgtgg 240
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 596 ccacttatggaggctctcttgtcatctacattctccaataagatagtcactcacctgtgg 537

                                                                       
Query: 241 ctttttcaagtctaaatatattgagtttaaaagtttttaaacatggcactattactatta 300
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 536 ctttttcaagtctaaatatattgagtttaaaagtttttaaacatagcactattactatta 477

                                                                       
Query: 301 aattttaaattcattcacagtgcctacatgtctagtttttggcaggtactt-tgagtggt 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 476 aattttaaattcattcacagtgcctacatgtctagtttttggcaggtacttgtgagtggt 417

                                                                       
Query: 360 gtctaacacattagccaatgcaagcagttcttctacctattcagaaatgtgtgtggaagg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gtctaacacattagccaatgcaagcagttcttctacctattcagaaatgtgtgtggaagg 357

                                                                       
Query: 420 actataatcaatagtattttcatcgtcagacatactttctatgtattcttcctcctgtta 479
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 356 actataatcaatagtattttcatagtcagacatactttctatgtattcttcctcctgtta 297

                                                                       
Query: 480 aattaaaagttgtttagttgaccaaatctgcctatcaaatgttcctaatcccacctctat 539
           |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 296 aattaaaaattgtttagttgaccaaatctgtctatcaaatgttcctaatcccacctctat 237

                                               
Query: 540 acttactttttctaaggcatcttggcattgatgtca 575
           ||||||||||||||||||||||||||||||||||||
Sbjct: 236 acttactttttctaaggcatcttggcattgatgtca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space:   545225
Effective search space used:   545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)