Query= MSMg01no514_g11.b1 MSMg01no514_g11.b1 CHROMAT_FILE:
MSMg01no514_g11.b1 PHD_FILE: MSMg01no514_g11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:17 2005
(665 letters)
>mm_chr3_75668913_75669977
Length = 1065
Score = 555 bits (287), Expect = e-162
Identities = 315/331 (95%), Gaps = 11/331 (3%)
Strand = Plus / Minus
Query: 1 atcattaccaagctgttgtatgatcttgactgaatagtggagacatcaaggtcattgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 atcattaccaagctgttgtatgatcttgactgaatagtggagacatcaaggtcattgttt 601
Query: 61 gggacagtaagtgtgcaggtctgccctgtccttcatcaagggctctatgaaattcattgt 120
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 600 gggacagtaagtgtgcaggtctgccctgcccttcatcaagggctctatgaaactcattgt 541
Query: 121 aagctataa-----------atgatctgtcatgaaggaacaaagtattccatcactaatg 169
||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 540 aagctataagaagctaaagcatgatctgtcatgaaggaacaaagcattccatcactaatg 481
Query: 170 ctggcagacaacatataactgcatatcgttgtgcataaataatttgtttaaggaattgtt 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ctggcagacaacatataactgcatatcgttgtgcataaataatttgtttaaggaattgtt 421
Query: 230 tatttagaggtctaaataatatatttaaatagcgcgttgaagaagctcattttagataaa 289
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 420 tacttagaggtctaaataatatatttaaatagtgcgttgaagaagctcattttagataaa 361
Query: 290 ttaaaaacacatatgtataaaaagaaacagt 320
|||||||||||||||||||||||||||||||
Sbjct: 360 ttaaaaacacatatgtataaaaagaaacagt 330
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_g11.g1 MSMg01no514_g11.g1 CHROMAT_FILE:
MSMg01no514_g11.g1 PHD_FILE: MSMg01no514_g11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:17 2005
(661 letters)
>mm_chr3_75507303_75508363
Length = 1061
Score = 1122 bits (580), Expect = 0.0
Identities = 640/660 (96%), Gaps = 1/660 (0%)
Strand = Plus / Plus
Query: 2 gagaacaggaaagaaaagagcaatgttctagatatgtctagcaaggtcctttcacgtgac 61
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 202 gagaacaggaaagaaaagaacaatgttctggatatgtctagcaaggtcctttcacgtgac 261
Query: 62 agctagagacaaatgtaaatcctacaaacctgcagatatattgcatatctgacagctgag 121
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agcgagagccaaatgtaaatcctacaaacctgcagatatattgcatatctgacagctgag 321
Query: 122 tatcattccatttcttcactgtaagttcacttattcctaaaggatactattattaccttc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tatcattccatttcttcactgtaagttcacttattcctaaaggatactattattaccttc 381
Query: 182 ttagtactaaatcatgatctgtaattatgatatttaaattggatgcttatatctctgata 241
||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 382 ttaatactaaatcatgatatgtaattatgatatttgaattggatgcttatatctctgata 441
Query: 242 tactacaattacaaagaattaaaacaatacaaagaatcaataaaaccaagagctgtttct 301
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tactataattaaaaagaattaaaacaatacaaagaatcaataaaaccaagagctgtttct 501
Query: 302 ttaagaaaatcaacaagatcgataaacccttagccaaactaattaaaagatgtagagaca 361
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct: 502 ttaagaaaatcaacaagatcaataaacccttagccaaactaactaaaagatgtagagaca 561
Query: 362 gcatccaaataaacaaaatcagaaatgaaaagggagacataagaacagacaatgaggaaa 421
| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 562 gtatccaaataaacaaaatcagaaatgaaaagggagacataagaacagacaatggggaaa 621
Query: 422 ttaaaaatattaacaaaaaacccaatattcttatttcaaaaactaatacttcacaaaatt 481
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 622 ttaaaaatattaacaaaaa-cccaaaattcttatttcaaaaactaatacttcacaaaatt 680
Query: 482 gcaaaaccttacttaaatggatgattttctagacaagtactatttaccaaagttaactca 541
||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 681 gcaaaaccttactgaaatggatgattttctagacaaatactatttaccaaagttaaatca 740
Query: 542 agaaaaagtaaactatttaaacagccttataacccctaaagaaatcattaaaatctccca 601
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 741 agaaaaagtaaactatttaaacagccttataacccctaaagaaatcattaaagtctccca 800
Query: 602 accaaaaaaagcttagagatggacagttttagctcagagttctaccagacttatactcct 661
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 801 accaaaaaaagcttagagatggacacttttagctcagagttctaccagacttatactcct 860
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
