GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTATTAG
TGTATGAATCACTTCCCACAGACTCCCCGGAACTCATCATGCAGAGTGTA
TGTATATGTCTGTGTCATAACTGTCTTATTAAATGGAGATTTTTTTAATT
AATTATTTTATTTATTTACATTCCAAATATTCCCCTCCCAGTCCCTGCTC
CCAGAGTTCTTCACTCTATCCTCCTCCCCTTTACCTCTAAGAGGGTGCTC
CCCCTCCCATCCATCCTCCCACATCACCCTTCCCTGGGGCATCAAGTCTC
TATTGGATTAGGCGAATCCTCGTCCACTGAGGCCAGATAAGGTAGTCCTC
TGCTAGATATGTGCCCAGGACCAGACCATGTATGCTCTTTGGTTGGTGGG
TCAGTCTCTGAGAGCTCCCAGAGTTGACACTGTTGGTAGAAATTGTTTTT
TTAAATGAAACATCTTTATTGTGAAACCTTAAACAAAATCACACAGCATT
AAGGAAGTAAGAAGGAAGGCAGGAGAAATGGCTTAGTAACTGAGCACATG
ACCTGCTCTTGAAAAGGACCACACTACATTCACAACATCTATAACTCCAG
CTCCAGGGTCCAAGGTCCTCTTCTGGTCTTCATGTGCTGCATATAAACCC
ATGTAAGTACACACACACACACACACACACACACACACATTCACACACAC
AATGACTTTTAATTCTTTAAAATTTATTTTAAAAAGGAAATAAAACAACT
CTC

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAACACCT
GAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAA
CCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCA
GGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCA
TTGTTGGTGAGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGC
GGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCT
CTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATG
CTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAG
AACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATG
TACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATT
CCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACAC
ATTCACAAAGAAACTCACACAATATGTACTCACTGATAAGTGGATATTAG
CCCCAAACCTAGGATACCCAAGATATAAGATATAATTTGCTAAACACATG
AAACTCAAGAAGAATGAAGACTGAAGTGTGGACACTATGCCCTTCCTTAG
ATN

Query= MSMg01no514_h18.b1 MSMg01no514_h18.b1 CHROMAT_FILE:
MSMg01no514_h18.b1 PHD_FILE: MSMg01no514_h18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:24 2005
         (681 letters)



>mm_chr3_33849789_33850869
          Length = 1081

 Score = 1110 bits (574), Expect = 0.0
 Identities = 586/590 (99%)
 Strand = Plus / Minus

                                                                        
Query: 66   atgtatatgtctgtgtcataactgtcttattaaatggagatttttttaattaattatttt 125
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 atgtatatgtctgtgtcataactgtcttattaaatggagatttttttaattaattatttt 1022

                                                                        
Query: 126  atttatttacattccaaatattcccctcccagtccctgctcccagagttcttcactctat 185
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 atttatttacattctaaatattcccctcccagtccctgctcccagagttcttcactctat 962

                                                                        
Query: 186  cctcctcccctttacctctaagagggtgctccccctcccatccatcctcccacatcaccc 245
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961  ccccctcccctttacctctaagagggtgctccccctcccatccatcctcccacatcaccc 902

                                                                        
Query: 246  ttccctggggcatcaagtctctattggattaggcgaatcctcgtccactgaggccagata 305
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 901  ttccctggggcatcaagtctctataggattaggcgaatcctcgtccactgaggccagata 842

                                                                        
Query: 306  aggtagtcctctgctagatatgtgcccaggaccagaccatgtatgctctttggttggtgg 365
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841  aggtagtcctctgctagatatgtgcccaggaccagaccatgtatgctctttggttggtgg 782

                                                                        
Query: 366  gtcagtctctgagagctcccagagttgacactgttggtagaaattgtttttttaaatgaa 425
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  gtcagtctctgagagctcccagagttgacactgttggtagaaattgtttttttaaatgaa 722

                                                                        
Query: 426  acatctttattgtgaaaccttaaacaaaatcacacagcattaaggaagtaagaaggaagg 485
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 721  acatctttattgtgaaaccttaaacaaaatcacatagcattaaggaagtaagaaggaagg 662

                                                                        
Query: 486  caggagaaatggcttagtaactgagcacatgacctgctcttgaaaaggaccacactacat 545
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661  caggagaaatggcttagtaactgagcacatgacctgctcttgaaaaggaccacactacat 602

                                                                        
Query: 546  tcacaacatctataactccagctccagggtccaaggtcctcttctggtcttcatgtgctg 605
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  tcacaacatctataactccagctccagggtccaaggtcctcttctggtcttcatgtgctg 542

                                                              
Query: 606  catataaacccatgtaagtacacacacacacacacacacacacacacaca 655
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  catataaacccatgtaagtacacacacacacacacacacacacacacaca 492


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space:   718641
Effective search space used:   718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)