Query= MSMg01no515_c24.b1 MSMg01no515_c24.b1 CHROMAT_FILE:
MSMg01no515_c24.b1 PHD_FILE: MSMg01no515_c24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:23 2005
(388 letters)
>mm_chr2_72655537_72656329
Length = 793
Score = 642 bits (332), Expect = 0.0
Identities = 359/370 (97%), Gaps = 5/370 (1%)
Strand = Plus / Minus
Query: 4 ggaattcctctttcttgccatttttgggcagctgtttctgtttctttcaggaacttattt 63
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 573 ggaattcctctttcttgtcatttttgggcagctgtttctgtttttttcaggaacttattt 514
Query: 64 gtctcagttcttcaagcatatttatagttgctcttttgagttcttagccttggattttca 123
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gcctcagttcttcaagcatatttatagttgctcttttgagttcttagccttggattttca 454
Query: 124 tctaacacactctcagtaaatgccattcatttaggttagtaaatcctgcaggagttatgg 183
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 453 tctaacatactctcagtaaatgccattcatttaggttagtaaatcctacaggagttatgg 394
Query: 184 tactttggtttttcatgtttcttatggtacagtgttgggatttcattgtttcag---ttt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 393 tactttggtttttcatgtttcttatggtacagtgttgggatttcattgtttcagtttttt 334
Query: 241 tttttttaatcagctatactatttcagttgaagtatttacaatggtcaagtggggcttag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tttttttaatcagctatactatttcagttgaagtatttacaatggtcaagtggggcttag 274
Query: 301 atgtggtacagtagaggtgagtagttcagaaaataactcttcagtccagaaactc--ggc 358
|||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 273 atgtggtacagtagaggtgagtagttcagaaaataactcttcagtccagaaagtcagggc 214
Query: 359 aactgatgaa 368
||||||||||
Sbjct: 213 aactgatgaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 793
Length adjustment: 9
Effective length of query: 379
Effective length of database: 784
Effective search space: 297136
Effective search space used: 297136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_c24.g1 MSMg01no515_c24.g1 CHROMAT_FILE:
MSMg01no515_c24.g1 PHD_FILE: MSMg01no515_c24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:24 2005
(635 letters)
>mm_chr3_67750257_67751284
Length = 1028
Score = 1120 bits (579), Expect = 0.0
Identities = 618/635 (97%), Gaps = 7/635 (1%)
Strand = Plus / Plus
Query: 1 caggggcctgcttatttactgaatctattcagctttgatctgaattattacctagggagt 60
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 caggggcctgcttatttgctgaatctattcagctttgatctgagttattacctagggagt 260
Query: 61 catgaaacaaagccaagaatgaatagaaaatacatacacaaaagagcaaatgtaacttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catgaaacaaagccaagaatgaatagaaaatacatacacaaaagagcaaatgtaacttcc 320
Query: 121 ttcttgtgaccttttctgcccttctaggaccttcaacagatggctttcaaacactcagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcttgtgaccttttctgcccttctaggaccttcaacagatggctttcaaacactcagat 380
Query: 181 gggtagcatttcttccagaactgacatattcaagctgtcttcctcagaaactttccacac 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggtagcatttctcccagaactgacatattcaagctgtcttcctcagaaactttccacac 440
Query: 241 agcatccagcccttcccatcatcaaaatttccctatttcctggcacgcatctaagtaggg 300
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcatccagctcttcccaccatcaaaatttccctatttcctggcacgcatctaagtaggg 500
Query: 301 ggatactgttcttgcaaagcagtgctcacttgttcaggaatcaggatggagaacaactgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggatactgttcttgcaaagcagtgctcacttgttcaggaatcaggatggagaacaactgt 560
Query: 361 atttgaacccaatgcagagtgcatggggcacaatacttgagctggaggttctaagaaata 420
|||||||||||||||| ||||||||||||||||||||||||||| |||||| ||
Sbjct: 561 atttgaacccaatgca-------tggggcacaatacttgagctggaggttgtaagaagta 613
Query: 421 tagagattttaatcagttagacaagactgcctaaaaagatatttgggcactctatattaa 480
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 614 tagagattttaatcagttagacaaggctgcctaaaaagatatttgggcactctatattaa 673
Query: 481 atgcaagatctagaataaattcaaagacttagaaaagtgctccttaggacagcttctgcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 atgcaagatctagaataaattcaaagacttagaaaagtgctccttaggacagcttctgcg 733
Query: 541 ccaatgggaagggggatggttgtgaataaaaggaagttgttttcaagaaataatttggag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 734 ccaatgggaagggggatggttgtgaataaaaggaagttgttttcaagaaataattaggag 793
Query: 601 ccagctggactagtgctctgggaagctgtgctgac 635
|||||||||||||||||||||| ||||||||||||
Sbjct: 794 ccagctggactagtgctctgggcagctgtgctgac 828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1028
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1018
Effective search space: 636250
Effective search space used: 636250
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
