Query= MSMg01no516_h23.b1 MSMg01no516_h23.b1 CHROMAT_FILE:
MSMg01no516_h23.b1 PHD_FILE: MSMg01no516_h23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:15 2005
(373 letters)
>mm_chr3_75073597_75074370
Length = 774
Score = 708 bits (366), Expect = 0.0
Identities = 372/374 (99%), Gaps = 1/374 (0%)
Strand = Plus / Plus
Query: 1 cctttcttc-ataagcgattttaagagactgaaagtaatgttttattttgaaacaagaaa 59
||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctttcttcaataagcaattttaagagactgaaagtaatgttttattttgaaacaagaaa 260
Query: 60 catcaaattattcttacacaaaacttaaccaatgtgccagttctgtgtttcaatagacac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catcaaattattcttacacaaaacttaaccaatgtgccagttctgtgtttcaatagacac 320
Query: 120 aataaatgttactaaatatctatttttacttttatggaacttacccaaaattaacttctg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aataaatgttactaaatatctatttttacttttatggaacttacccaaaattaacttctg 380
Query: 180 attattaacttgaatgctgtgattgaaatgtgcttactggaaaaccctcttatatgaagc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attattaacttgaatgctgtgattgaaatgtgcttactggaaaaccctcttatatgaagc 440
Query: 240 agcttattggtgaaggccaactatatttatcttaaacgctgaatgattaattattccaca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcttattggtgaaggccaactatatttatcttaaacgctgaatgattaattattccaca 500
Query: 300 accatagcaggtgtgcactgtgctgccatgtgatcaagttaatgataaatgatgaaatgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accatagcaggtgtgcactgtgctgccatgtgatcaagttaatgataaatgatgaaatgt 560
Query: 360 aagtgaaaagaaaa 373
||||||||||||||
Sbjct: 561 aagtgaaaagaaaa 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 774
Length adjustment: 9
Effective length of query: 364
Effective length of database: 765
Effective search space: 278460
Effective search space used: 278460
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_h23.g1 MSMg01no516_h23.g1 CHROMAT_FILE:
MSMg01no516_h23.g1 PHD_FILE: MSMg01no516_h23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:15 2005
(385 letters)
>mm_chr3_75271323_75272108
Length = 786
Score = 652 bits (337), Expect = 0.0
Identities = 378/397 (95%), Gaps = 13/397 (3%)
Strand = Plus / Minus
Query: 1 caatggtctacagtaaaag-aaaaaaatgtactttgatctctatgactgatgtttagata 59
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 caatggtctgcagtaaaagaaaaaaaatgtactttgatctctatgactgatgtttagata 421
Query: 60 gcatcatcaagcttcaatgccacatggaattttatgtaaagaaaaagaatagcttgatgt 119
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gcatcatcaaacttcaatgccacatggaattttatgtaaagaaaaagaatagcttgatgt 361
Query: 120 tctagccttttttacatttagtaattgagccagcatgtgttactcattatgactgccata 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tctagccttttttacatttagtaattgagccagcatgtgttactcattatgactgccata 301
Query: 180 ccttggcttccactggcatcaaagtatttgaagagcaatttaacttggttgccttgatca 239
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ccttggcttccactggtatcaaagtatttgaagagcaatttaacttggttgccttgatca 241
Query: 240 aagttaatgtgagtgcttataatagtatttagcaa-----gga-----atagtttgttga 289
||||||||||||||| ||||||||||||||||||| ||| ||||||||||||
Sbjct: 240 aagttaatgtgagtgtttataatagtatttagcaaagaatggatgctcatagtttgttga 181
Query: 290 atttataaatgaaactctccttgatgcctcatgatattcatttccttgcctatttagtca 349
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 180 atttataaatgaaactctccttgatgcctcacgatattcatttccttgcctatttagtca 121
Query: 350 taaatggatgattttgaaagtaa-tctttcttctgac 385
|||||||||||||| ||| |||| |||||||||||||
Sbjct: 120 taaatggatgatttggaa-gtaaatctttcttctgac 85
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 786
Length adjustment: 9
Effective length of query: 376
Effective length of database: 777
Effective search space: 292152
Effective search space used: 292152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
