XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAGATGT
ATTCAACTTGACAAGAATAGCCATCACTATGTAATTCATATATCAAAATA
CATCTTCAGTGTAATAGCTAATAGATACAGGGCTTGCTATCTGACGCTGA
CATTTTGAGCAGACTTAACTGAATACTCCCGAGACACTGAGACAAGGTAC
TAGCATGTTATCAGTCTCTTTCCTCCACACTAAGTACAGGAAGAGCAGGA
AACAGCCCCATCAAGCTACTATGGGTTGGAACAGGCTAGCTGACCTGGCC
ATGACATTACCTGCTGTGTTAAATCCTTTCTCCAGCATGCTTTTATCTAC
AGCTATATTAGCCCTCCTTGAAAACTAACCCCACACTCATGGCCACTCTT
CCTCAAGGTCCCCGATTTTCCTTTCACGGTCTCTAGCATTTACCATTCTT
TTCAGCTGCTCCCTGCAGCTTAGGGAGACAACTGTTTGGGGTGTCCTTAT
TTAATTTTCTGTGTCTTCCTCAGAAGGTAGTGTGAGGATTTCCCATTCCC
CCTTTCCCACTCATTAGAGTACCTTATTTTTGGAAAGTTTTTATGGCTCC
TTTTCTTAGTCAGGGTTTTTATTCCTGCACAAACATCATGACCAAGAAGC
AAGTTGGGGAGGAAAGGGTTTATTCAGCTTACTCTTCCACATTGCTGTTC
ATCACTGAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCANGAG
CTGATGCAGAAGC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXACATTAATGCTCTTTTGCCAAAGAATTGCTGTGGGCA
CATTGAGTAACAATAACTAAAATAAGCAGCTAATATTTGATTACCATTGA
TTACAACTGATGACAATTGATTACAGAAGCTTCCTCTACTTTCTGTAAAG
CTTTCTGTTTTTCACCAGTTTATTTGCATTTCCCTTGATAACATCCAAAA
AAGGCTTAAGTCCTCCTGTGATGAGTTTAAGGTGAGGTCTTAGCCAATTA
ACATCTCCTGAAATCTTTTAAAAACAATTTGAAGTAAACAAATCATCTTT
TCTTAAATTTTCTGTGCCATAATTTTTCTAGGATATAACTGAGACCCTAA
ATATTAAAAAGACATTGCCTCTGCATCTTTTCTGGAGCAACAGCTACTCC
ACAAAATTTGAACGCTCCAGTGTAAGAGCAAAGATTAATAGTAAAATTTC
CTTCAGAGGCATTAGCAAATAAAATACTTTCCATTGAAAAAATAATGTAC
ACTGAAAGATTCAAAGTCCTAGCTTCTTGTATTGAAACAGAGACAAAAAA
TTTTTTTCTTACATAATGTAAGGCTATTAGGCATACCTAGAGGCAAAACT
TTCCAATGATCACAAGCTCACTACAACCACACCCTTTATAATTATCGGGA
TGCAAAGGAAAAAACAACCTTGCAAATCTATAAAAATTCTATATGGAGTA
GGCAGGCTAGA

Query= MSMg01no517_l20.b1 MSMg01no517_l20.b1 CHROMAT_FILE:
MSMg01no517_l20.b1 PHD_FILE: MSMg01no517_l20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:56 2005
         (699 letters)



>mm_chr3_19520257_19521355
          Length = 1099

 Score = 1297 bits (671), Expect = 0.0
 Identities = 689/695 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccagatgtattcaacttgacaagaatagccatcactatgtaattcatatatcaaa 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagatgtagtcaacttgacaagaatagccatcactatgtaattcatatatcaaa 264

                                                                       
Query: 65  atacatcttcagtgtaatagctaatagatacagggcttgctatctgacgctgacattttg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atacatcttcagtgtaatagctaatagatacagggcttgctatctgacgctgacattttg 324

                                                                       
Query: 125 agcagacttaactgaatactcccgagacactgagacaaggtactagcatgttatcagtct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agcagacttaactgaatactcccgagacactgagacaaggtactagcatgttatcagtct 384

                                                                       
Query: 185 ctttcctccacactaagtacaggaagagcaggaaacagccccatcaagctactatgggtt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 385 ctttcctccacactaagtacaggaagagcaggaaacagccccatcaagctagtatgggtt 444

                                                                       
Query: 245 ggaacaggctagctgacctggccatgacattacctgctgtgttaaatcctttctccagca 304
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 445 ggaacaggctagctgacctggccatgacattacctgctgtgctaaatcctttctccagca 504

                                                                       
Query: 305 tgcttttatctacagctatattagccctccttgaaaactaaccccacactcatggccact 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgcttttatctacagctatattagccctccttgaaaactaaccccacactcatggccact 564

                                                                       
Query: 365 cttcctcaaggtccccgattttcctttcacggtctctagcatttaccattcttttcagct 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttcctcaaggtccccgattttcctttcacggtctctagcatttaccattcttttcagct 624

                                                                       
Query: 425 gctccctgcagcttagggagacaactgtttggggtgtccttatttaattttctgtgtctt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gctccctgcagcttagggagacaactgtttggggtgtccttatttaattttctgtgtctt 684

                                                                       
Query: 485 cctcagaaggtagtgtgaggatttcccattccccctttcccactcattagagtaccttat 544
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 685 cctcagaaggtagtgtgaggatttcccattccctctttcccactcattagagtaccttat 744

                                                                       
Query: 545 ttttggaaagtttttatggctccttttcttagtcagggtttttattcctgcacaaacatc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttttggaaagtttttatggctccttttcttagtcagggtttttattcctgcacaaacatc 804

                                                                       
Query: 605 atgaccaagaagcaagttggggaggaaagggtttattcagcttactcttccacattgctg 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 atgaccaagaagcaagttggggaggaaagggtttattcagcttactcttccacattgctg 864

                                              
Query: 665 ttcatcactgaaggaagtcaggactggaactcaag 699
           ||||||||  |||||||||||||||||||||||||
Sbjct: 865 ttcatcaccaaaggaagtcaggactggaactcaag 899


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1099
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1089
Effective search space:   750321
Effective search space used:   750321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)