XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTTGATT
CTCTTGGATTTGAGCTTTGTACAAGGATATAAGAATGGATAGATTCACAT
TCTTCATGCTAACTGTCAGTTGAGCCACACCATTTGTTGAAAATGCTTTT
TTCCACTGGATGTTTTTAGCTCCTTTGTCAAAGATCAAGTGACCATGGGT
GTGTGGGTTCATTTCTGGGTCTTCAGTTCTATTCCATTGATCTGTCTGTC
ATTGTACCAGTACCATGCAGTTTTTTATCACAATTGCTCTGTAGTAAAGC
TTGAAGTCAGGGATGGTGAGTCCACCAGAGGTTCTTTCATTGTTGAGAAT
AGTTTTTGCTATCCTAGGTTTTTTGTTATTCCAGATGAATTTGCAAATTG
CCCTTTCTAGTACTTGAAGTCATAGCCAGAGCAGCTAGACAACAAAAGGA
GATCAGAGGGATATAGATTGGAAAGGAAAAAGTCAAAATGTCACTATCTG
CAGATGATATGATAGTATACATAAGTGACCCCAAAAATTCCAGAGAACTC
CTAAACCTGATAACTTCAGTGAAGTAGCTGGATATAAAATTAAACAAATC
AGTGGCCTTTCTCTACACAAAGGATAAACAGGCTGAGAAAGAAATTAGGG
AAACAACACCCTTCATAATAGTCACAAGTAATAATACCTTGATGTAACTA
AGCAAGTGAAAGATCTGTATGATAACNNACTTCAGTCTTTGAAGAAAGAA
ATTGAAGATCTCAGAAGAATGAA

GGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXCAAACTCCAAGACTCAGAACTTGGACGCAAAAGAGGG
TTATCAGTGTAGTGCCTTGTCCAGCTGAGATTTACTAGACAGCCCAGTAT
TAGCAGTTCCCAGGGGGCCTGGGCTTAGCTTGAGTCAGTCAGGGTGTGAT
AGGCCACAGTGCTGATCTCACCTAGGCAAGCCAACCAAGTTCTCTGCCCC
CTCCACCCACCCCCTCAGCCTGCTGTCAGCCACCTCTACCACCCCCACCC
CTGCAGTTACCTCCTCTCTGCTATTTACCCACAACACAGCCAGCTGTGGA
AGTTCGGTGACTCATTTGCTACTTAGGTATTTTGGGTTCATTACCCTTCA
GCCACTTTACTGAGAAGAGCCACTCCCAGTGGTGCCAAAATAGAGAAGAG
AGGAAGTAGGGCCAGCAGATGGGAGGGGGTGGGGCAGAAATTCAAGGACT
GCTGTGGAAAAGGTCAACGGAGGTGCTGTTGTCCACGCCAGCGCTCCTGA
GCAAGGCCACTCCAAAAGCAACAATGGAAAGGAAGCACGGCTTTGATTAA
AACTTCATTGAGAGTCCTGGACACACAGCCACAAGTTCTCAACAACAGAG
ATGATGTGTTCAGGCATCCAGGGGAAGCGTCATTGCTCCTTGGGAATATT
TTTAAGCAACCACACCCAAGCCGAGTTGACTTGGCCAAGAACAGGGTGGA
AGGCACAAATACTTGAGAAGTAAGCCC

Query= MSMg01no517_o17.g1 MSMg01no517_o17.g1 CHROMAT_FILE:
MSMg01no517_o17.g1 PHD_FILE: MSMg01no517_o17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:10 2005
         (586 letters)



>mm_chr3_105628225_105629210
          Length = 986

 Score = 1133 bits (586), Expect = 0.0
 Identities = 586/586 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   caaactccaagactcagaacttggacgcaaaagagggttatcagtgtagtgccttgtcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaactccaagactcagaacttggacgcaaaagagggttatcagtgtagtgccttgtcca 260

                                                                       
Query: 61  gctgagatttactagacagcccagtattagcagttcccagggggcctgggcttagcttga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgagatttactagacagcccagtattagcagttcccagggggcctgggcttagcttga 320

                                                                       
Query: 121 gtcagtcagggtgtgataggccacagtgctgatctcacctaggcaagccaaccaagttct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcagtcagggtgtgataggccacagtgctgatctcacctaggcaagccaaccaagttct 380

                                                                       
Query: 181 ctgccccctccacccaccccctcagcctgctgtcagccacctctaccacccccacccctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgccccctccacccaccccctcagcctgctgtcagccacctctaccacccccacccctg 440

                                                                       
Query: 241 cagttacctcctctctgctatttacccacaacacagccagctgtggaagttcggtgactc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagttacctcctctctgctatttacccacaacacagccagctgtggaagttcggtgactc 500

                                                                       
Query: 301 atttgctacttaggtattttgggttcattacccttcagccactttactgagaagagccac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttgctacttaggtattttgggttcattacccttcagccactttactgagaagagccac 560

                                                                       
Query: 361 tcccagtggtgccaaaatagagaagagaggaagtagggccagcagatgggagggggtggg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcccagtggtgccaaaatagagaagagaggaagtagggccagcagatgggagggggtggg 620

                                                                       
Query: 421 gcagaaattcaaggactgctgtggaaaaggtcaacggaggtgctgttgtccacgccagcg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcagaaattcaaggactgctgtggaaaaggtcaacggaggtgctgttgtccacgccagcg 680

                                                                       
Query: 481 ctcctgagcaaggccactccaaaagcaacaatggaaaggaagcacggctttgattaaaac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctcctgagcaaggccactccaaaagcaacaatggaaaggaagcacggctttgattaaaac 740

                                                         
Query: 541 ttcattgagagtcctggacacacagccacaagttctcaacaacaga 586
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttcattgagagtcctggacacacagccacaagttctcaacaacaga 786


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space:   562176
Effective search space used:   562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)