GCGGCCGCTATACGACTCCTATATTGAGAGGATCCGCGGAATTCCTGATC
TTTCCAAACTTTTATCATGAATGGGTGTTATGAATTACACTGGCTATGAC
AGTGCCTTTGTATTATGACAGGAGTCCTAGGGAGCCTCCTGTTTCTTTCA
TGGTCATTGAAAGTCACCTGCATAATTGATAAAGTTCATTTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTC
TCTACTTCTGGGGGTAGTTAGATTGACTTGTGGGTCATCACACCCCATGG
CTGAGACCCACACTGAATGTGCTTGGCACAATTATGTAGGCCGGAAATCT
GGATGGGACAAAATCAAAGAAGAGGGAAAGATGGGATAGATGGGATGGGA
AATGATGTGATGCAGTTACAAGACTGGTACCCTGTTTGCTGCTGACAACC
TACTCTAGGCTCAATGTTCTTCAGTTTTCCTTGATCCTCTTAGTCCTCAG
CCTGGACTCGGTGTTCCATAGTCTCTTCCTCTTGTCCTGAGGTCCAAGCA
TAGAAGAAGTATCTGCTTGTTCCTCATGCTTAGCCTGTAACAGCCACTGT
AAGAATGTTCAACCCCTGGCTGTGTAAATCAGTTTAATCAATTTCCTCAT
ATAAAATATGGATCTTATCCAGTTCTAGGCTCTAAGGAACCCTATATTTC
CCCCCCCATCTCCTTAGAAACATTTGGGTTTAATTGAAGGGCAACTCGGA
CATAAACTGTTTGTTGACAACCCTAACCAACCCCAGTTTTTGAATAATTC
T

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCTGAGAAGCACCAGA
AAAAATGCTCAGCATCCTTAGTCATCAGAGAAATGCAAATCAAAACAACC
CTGAGATTCCATCTCACACCGTTCAGAATGGTTAAGATCAAAAATTCAGG
TGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCTTCCATT
GTTGGTGGAATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGG
TTCCTCAGAAAATTGAACATAGTACTACCGGAGGATCCCGCACTACCTCT
CCTGGGCATATATCCAGAAGATGTCCCAACAGGTAAGAAGGACACATGCT
CCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAA
CCCAGATGCCCCTCAACAGAGGAATGGATACAAAAAATGTGGTACATCTA
CACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCC
TAGGCAAATGGATGGACCTGGAGAGCATCATCCTGATTGAGGTAACACAA
TCACGAAGGAATTCAAATGATATGTACTCACTGATAAGTGGATATTAGCC
CCGAAACTTAGTATACCCGAGATATAAAATACAATTTTGCAAATACATGA
AACTGAAGAAGAATGAAGACCAAAGTGTGGACAATTTGCCCTTCTTAGAT
TGGAAACATCACCATGGGAGGATTTTAGAGACAAGTTTGAGCTGAAACA

Query= MSMg01no517_o22.b1 MSMg01no517_o22.b1 CHROMAT_FILE:
MSMg01no517_o22.b1 PHD_FILE: MSMg01no517_o22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:11 2005
         (473 letters)



>mm_chr3_126051931_126052803
          Length = 873

 Score =  719 bits (372), Expect = 0.0
 Identities = 409/428 (95%), Gaps = 13/428 (3%)
 Strand = Plus / Minus

                                                                       
Query: 46  tatgaattacactggctatgacagtgcctttgtattatgacaggagtcctagggagcctc 105
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 tatgaattacactggctatgacagtgcctttgtattatgacaggagtcctagggagcctc 667

                                                                       
Query: 106 ctgtttctttcatggtcattgaaagtcacctgcataattgataaagttcatttctctctc 165
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 ctgtttctttcatggtcattgaaagtcacctgcataattgataaagttcatttctctctc 607

                                                                       
Query: 166 tctctctctctctctctctctctctctctctctctctctctctgtctctctctctacttc 225
           ||||||||||||||||||||||||||||||||||||||||||  ||||| ||||  ||||
Sbjct: 606 tctctctctctctctctctctctctctctctctctctctctc--tctctttctc--cttc 551

                                                                       
Query: 226 tgggggtagttagattgacttgtgggtcatcacaccccatggctgagacccacactgaat 285
           | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 taggggtggttagattgacttgtgggtcatcacaccccatggctgagacccacactgaat 491

                                                                       
Query: 286 gtgcttggcacaattatgtaggccggaaatctggatgggacaaaatcaaagaagagggaa 345
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 490 gtgcttggcacaattatgtaggccagaaatctggatgggacaaaatcaaagaagagggaa 431

                                                                       
Query: 346 agatgggatagatgggatgggaaatgatgtgatgcagttacaagactggtaccctgtttg 405
                    ||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 430 ---------agatgggatgggagatgatgcgatgcagttacaagactggtaccctgtttg 380

                                                                       
Query: 406 ctgctgacaacctactctaggctcaatgttcttcagttttccttgatcctcttagtcctc 465
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ctgctgacaacctactctaggctcaatgttcttcagttttccttgatcctcttagtcctc 320

                   
Query: 466 agcctgga 473
           ||||||||
Sbjct: 319 agcctgga 312


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 26
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space:   399569
Effective search space used:   399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)