NTTTATTATTTGCGGGCGGTAAACGACTCACTTTTCCGAGAGGATCCGCG
GAATTCACTGATTCTACTGACCTTACCGTGTTCCCCATCATCCTGAAGCA
GCTACTCTAATAGAAAGATGGAATGGCCTTTTGAAGACATAGTTACAGCA
CCAATTAGGTGGAAATAGTATGGAAAGCTGGGGCAGAGTTCTTCAGAAGG
CAGTATATGCTTTGAATCAGCATCTGATATATGGTACAGTTTAACCCATA
GCCAAAATCCATGGTTCAAGGAATCAAGGGGTGGAAAAGGTAAGAGTTCC
ACTCACTATCACTCTTAGTGAACATCTAGGAAAAAAATTGCTTCCTGTAC
CCACAACTCTAGGTTCTGCTGGCCTGGAAATTTTGGTTCCAGAAGTAGGA
GTGCTCCTATCAGGAGCCACAACAAACATTCCGTAAAACTGAAAGGTCAG
ACTTCCCCTTCTTCTGGTCATTTTGGGCTTCTAATGTCCTTAAACCAACA
GACTAAGAAAGGAATAACTGTGTTAGGAGGCGAGATAGATACAGATTACC
ATGCATAAATTGGATTGCCTCTCCACAATGGAGGTAATCATGACTATGTC
TGGAGTTCAGGGAATCCCTTAGGTACTACCATGTCCTGTGATTAAAGTCA
TTGGGAAATGACAACAGCCTAATTCAAGCAGGGTGACAAAGGACACAGAC
CCATCATGAATGAATGTATGGAGCAATCCTCTGGGAAAAGAACCAAGACA
T

CCATTGTCTGTTTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCTTAGACTTCTACCTTAGCCATAC
AGATACCAATACTCTTGGTAGGAGTTTCCAGATTTTGAAGATAAGACCCT
ACTGCTGATTATATGAAATCTTCATACTTTTAGGCCGTGTTACATTACTG
GCTTATTAATGAATATTAACAAGTAAATTTTACAGTTTTCTGAGCAGCAC
AATAAGAGAACTAAAGTACATAGAAGAATGTAAACAAAAACCTGTCTTCA
CAAACATAATTAAATTGGTGATAGATTACATGGTCCCCAAGATGTCTTTA
CCTAGCTTTAGAAATATGTTCTTTTAAAGTTGTTTTATTTTAAATTTATA
AATCAAGTAAAATCAAAGAAGTGTTTGACAACACGCTAAAATGAAGGCTT
ATCAAACGTTTAGAAAGTATTGAAGCAACTGTATCCAATTTTATTGATGG
TTTTCTATTTGTATTCACTGGCTTGAATTGTGTATAAGGACACTTGGGGC
ATTAAAAAATCTTTTAACAGAATTTGATAAATTATAGGCATTCAATATAT
AATATTTATTCTACATAAAAGATAAGTTTTACTATGTATTTTACTTAACA
AGGAAACTCAATACCAATTACTATGTTGGTAATTTATTCAATAACAATAT
GTAATTTATTCATCACCCCATCACAGAGGCCAACTGTTGTATATGTTACT
TCTGT

Query= MSMg01no518_a17.g1 MSMg01no518_a17.g1 CHROMAT_FILE:
MSMg01no518_a17.g1 PHD_FILE: MSMg01no518_a17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:20 2005
         (584 letters)



>mm_chr3_13071031_13072014
          Length = 984

 Score = 1048 bits (542), Expect = 0.0
 Identities = 575/588 (97%), Gaps = 4/588 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcttagacttctaccttagccatacaga----taccaatactcttggtaggagtttccag 56
           ||||||||||||||||||||||||||||    ||||||||||||||||||||||||||| 
Sbjct: 197 tcttagacttctaccttagccatacagattattaccaatactcttggtaggagtttccat 256

                                                                       
Query: 57  attttgaagataagaccctactgctgattatatgaaatcttcatacttttaggccgtgtt 116
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 attttgaagataagaccctactgctgattatatgaaatcttcatacttttaggccgtgtt 316

                                                                       
Query: 117 acattactggcttattaatgaatattaacaagtaaattttacagttttctgagcagcaca 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 acattactggcttattaatgaatattaacaagtaaattttacagttttctgagcagcaca 376

                                                                       
Query: 177 ataagagaactaaagtacatagaagaatgtaaacaaaaacctgtcttcacaaacataatt 236
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 377 ataagagaactaaagtacatagaagaatgtaaacaaaaacctatcttcacaaacataatt 436

                                                                       
Query: 237 aaattggtgatagattacatggtccccaagatgtctttacctagctttagaaatatgttc 296
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 437 aaattggtgatagattacatggttcccaagatgtctttacctagctttagaaatatgttc 496

                                                                       
Query: 297 ttttaaagttgttttattttaaatttataaatcaagtaaaatcaaagaagtgtttgacaa 356
           |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tttttaagttgtttcattttaaatttataaatcaagtaaaatcaaagaagtgtttgacaa 556

                                                                       
Query: 357 cacgctaaaatgaaggcttatcaaacgtttagaaagtattgaagcaactgtatccaattt 416
           ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cacacttaaatgaaggcttatcaaacgtttagaaagtattgaagcaactgtatccaattt 616

                                                                       
Query: 417 tattgatggttttctatttgtattcactggcttgaattgtgtataaggacacttggggca 476
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 617 tattgatggttttctatttgtattcagtggcttgaattgtgtataaggacacttggggca 676

                                                                       
Query: 477 ttaaaaaatcttttaacagaatttgataaattataggcattcaatatataatatttattc 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ttaaaaaatcttttaacagaatttgataaattataggcattcaatatataatatttattc 736

                                                           
Query: 537 tacataaaagataagttttactatgtattttacttaacaaggaaactc 584
           || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tatataaaagataagttttactatgtattttacttaacaaggaaactc 784


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space:   559076
Effective search space used:   559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)