NAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTCAACTGAGGAATACAGAATGGCTGAGAAGCACCTGAAAAAA
TGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAACAACCCTGACA
TTTTACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAG
CAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGT
GGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGTGGTTCCTC
AGAAAATTGGACATAGTACTACCGGAAGATCCAGCAATTCCTTTCCTGGG
CATATACCCAGAAGATGTTCTGACTGGTAATAAGGACACATGCTCCACTA
TGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGA
TGCCCCTCAACAGAGGAATGGATACAGAAAGTGAGGTACATGTACACAAT
GGACTACTACTCAGCAATTAAAAACAATGAATTCATGAAATTCTTAGGCA
AATGGATGCATCTGGAGGATATCATCCTGAGTGAGGTAACCCAATCACAA
CAAAACACACATGGTATGCACTCACTGATAAGCAGATATTAGCCCATAAA
CTTAGAATATCCAAGATACAATTTGCAAAACACATGAAACTCAAGAAGAA
GGAAGACCAAAATGTAGATACTTCGTTCCTTCTTAGTTTGGGGGACAAAG
TACCCATGGAAG

NNCCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXATTTCCCTCATTCCTCAAGGATT
CGGAAAGTAACCAAGGTGCTTTAAGTGTGGTATATTATTAAGGTTTTAGG
TACAGAATGCTGAGATTAAATTCCAAGAAGTTTGGAAAATTAGAATGTAA
GTGCGGGTGTGAAATTATAAAGAGGATTATGAGTTACACATTGCTGTTGT
CAACGGACTCTGTTTCACCTGAACATGGATGTCAGTAAATGTTCAGGTGT
AAGTTCAGGATGTGAGTGACATTTCAGAAGTTGTGAATGTATGTTTATAG
TGGAGTGGCAAGAATCCTAATAACATGAGAAAAATCAAAAGAGCTCAACT
GATTTTAAATTATTTGGAGGTCTAAAAGACAGTAATGTGTGTGTGTGTGT
GTGTGCACATGCATGTGTGTTTGTATGTGTGTATGTGTGCATGAGTATCT
GTTTGTACCTGTGTATGTATATGTGTGTGTGCACACATGTGTATATATGT
GTATACATTATGTGTGCACATGTGCATCTTTGTGTATATGTGTATGTATG
TGTGTGCGCGCGCATGTGTCCATACATGCTTCATTCACATTATTGGCAAT
CATACCTCTCTCACTAGCTTTTGCTACCTAGAAATTGCTCATGGGTAGAA
CATGCTTATATCAATTGGAAAGGTTTGATTTTATACTCACATATCTGTAT
GAATGCATAACAGT

Query= MSMg01no518_h09.g1 MSMg01no518_h09.g1 CHROMAT_FILE:
MSMg01no518_h09.g1 PHD_FILE: MSMg01no518_h09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:52 2005
         (656 letters)



>mm_chr3_144976036_144977091
          Length = 1056

 Score = 1122 bits (580), Expect = 0.0
 Identities = 636/656 (96%), Gaps = 4/656 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttccctcattcctcaaggattcggaaagtaaccaaggtgctttaagtgtggtatatta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttccctcattcctcaaggattcggaaagtaaccaaggtgctttaagtgtggtatatta 260

                                                                       
Query: 61  ttaaggttttaggtacagaatgctgagattaaattccaagaagtttggaaaattagaatg 120
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaggttttaggtacagaacgctgagattaaattccaagaagtttggaaaattagaatg 320

                                                                       
Query: 121 taagtgcgggtgtgaaattataaagaggattatgagttacacattgctgttgtcaacgga 180
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 taagtgcgggtgtgaaattataaagaggattatgagttacacattactgttgtcaacgga 380

                                                                       
Query: 181 ctctgtttcacctgaacatggatgtcagtaaatgttcaggtgtaagttcaggatgtgagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctgtttcacctgaacatggatgtcagtaaatgttcaggtgtaagttcaggatgtgagt 440

                                                                       
Query: 241 gacatttcagaagttgtgaatgtatgtttatagtggagtggcaagaatcctaataacatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacatttcagaagttgtgaatgtatgtttatagtggagtggcaagaatcctaataacatg 500

                                                                       
Query: 301 agaaaaatcaaaagagctcaactgattttaaattatttggaggtctaaaagacagtaatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaaaaatcaaaagagctcaactgattttaaattatttggaggtctaaaagacagtaatg 560

                                                                       
Query: 361 tgtgtgtgtgtgtgtgtgcacatgcatgtgtgtttgtatgtgtgtatgtgtgcatgagta 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 561 tgtgtgtgtgtgtgtgtgcacatgcatgtgtgtttgtatgtgtgtatgtgtggatgagta 620

                                                                       
Query: 421 tctgtttgtacctgtgtatgtatatgtgtgtgtgcacacatgtgtatatatgtgtataca 480
           ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 621 tctgtttgtacctgtgtatgtatatgtgtgtgtgcgcacatgtgtatatgtgtgtataca 680

                                                                       
Query: 481 ttatgtgtgcacatgtgcatctttgtgtatatgtgtatgtatgtgtgtgcgcgcgcatgt 540
           |||||||||  |||||||||||||||||||||||||||||  |||||||| | | |  ||
Sbjct: 681 ttatgtgtgtgcatgtgcatctttgtgtatatgtgtatgt--gtgtgtgcacacac--gt 736

                                                                       
Query: 541 gtccatacatgcttcattcacattattggcaatcatacctctctcactagcttttgctac 600
           |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||
Sbjct: 737 gtccatacttgcttcattcacattattgacaatcatgcctctctcactagcttttgttac 796

                                                                   
Query: 601 ctagaaattgctcatgggtagaacatgcttatatcaattggaaaggtttgatttta 656
           |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 797 ctagaaattgctcatgggtagaacatgcttatatcaattgaaaaggtttgttttta 852


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space:   675716
Effective search space used:   675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)