NTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCACTAGAACAGGAAAAGCCTTTCTGAACAGGATATCATTAACAT
AGTCCCTTACATCAATAATTAACAAATGAAACCTCATTAAACTGAGACGC
TTCTGCATGGCAAAGGACACGCATCCAGACGAAGTGGAAGCCTACAGAAT
GGGAAAAGATTCTTTACCAGTGTACATCACATAGATGGCTAACCAATATC
CAAAATATATACAGCATTAAAAAAAACCTAGATATCAAGAAAACAAGTAA
CCCACTTAAAAAATGGGGCAGAGATCTAAACAGAATTCTTAAAAGAGGAA
TTTCAAATGGCTAAGAAATATAACAACCTTGGCCATCAGGAAAATGCAAA
TCAAAACCACTTTGAAAATTTATTTTATACCTGTCAGGATGGATAAGATC
AATAGACAAAGTGACAGCTCATGCTACTGAGGATGTGGAGTAACGAGACT
CTCCCTTCATTTCTGGTGGGAGTGCAAACTCTACAGCCACTGTGGAAATC
GGTGCGGTGGTTTCTTAGGAAGATGGGACTCAATCTATCTTAAGACCCAG
CTATACAACTCCTGGGCATATACCCAAAGGATGCTTCATCCTGCCACACA
GACAACTCAGCCAAAGTCATTGTTGCTATATTTGTAATAGTCAGAAATTA
AAAACAACCTAGATGCTCCTCAACAGAAGAATGGATAAAAAATGTGGTAT
CTTAACACAACAGAGTAA

NCCAATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACAGAGATCTGCCTCCCTTTGCCT
CCTGAGAGCTGGGATTAGAGGTGAGCACCACCATACCTGGTTTAGATACG
ATTGTAATCAGTTACCAATCCGTGTTGTCCTTTGTTCTATCCAGATGGAG
ATTGTGGGTGGGCAAGGAGATACTTTTCCAGGATTCCTTAGTATTTTGAG
TGTTGGCAGCAGGTAGGTGGGAACAAAAGCAGGTAGCACTCTGCAGTATT
CAGCTCTCAGGAAGGCCTCAAGTAGCAGGAGCCTTAGCTTTAGAAGTGTT
TGAACTCCTGTACAGGCTTAGAGGTCCAAGACCCTTAGCTTTACAAGTAT
TTCAGCTCTTGTGTGGACCTAGGGAGTTAGGATTCCTAAGCCCTTGGTGG
TAACCAGTTTTAAAACCCCTAGACCTGGGGACTGTTTTGAGGACCCCTGG
CTCTAAAGACACTCTACTTTCTGAAACTCTTTGTGACCAAGGCCTGCAGT
TCCTCTTGCTGGTCCCTCACAAGCTCCAGTTCTTCAGCTTCCTGCCTTTT
CTGTATTTCCACAGTTCCTCTCATTTTCACCTTGACCACCTTCTTGGATT
ATCCAGTTGCTCTTGTTGCTGTGGCCTCTGGTTGAGTTACCGATGCCATT
TGGCANGCCGTATGACCAGACTTTTGCTGCTGCCCTGGGCACATGCACAG
TTCAGTGGCTGCACAT

Query= MSMg01no518_j04.g1 MSMg01no518_j04.g1 CHROMAT_FILE:
MSMg01no518_j04.g1 PHD_FILE: MSMg01no518_j04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:00 2005
         (593 letters)



>mm_chr3_65473292_65474284
          Length = 993

 Score = 1108 bits (573), Expect = 0.0
 Identities = 588/593 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   acagagatctgcctccctttgcctcctgagagctgggattagaggtgagcaccaccatac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagagatctgcctccctttgcctcctgagagctgggattagaggtgagcaccaccatac 260

                                                                       
Query: 61  ctggtttagatacgattgtaatcagttaccaatccgtgttgtcctttgttctatccagat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctggtttagatacgattgtaatcagttaccaatccgtgttgtcctttgttctatccagat 320

                                                                       
Query: 121 ggagattgtgggtgggcaaggagatacttttccaggattccttagtattttgagtgttgg 180
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggagattgtggctgggcaaggagatacttttccaggattccttagtattttgagtgttgg 380

                                                                       
Query: 181 cagcaggtaggtgggaacaaaagcaggtagcactctgcagtattcagctctcaggaaggc 240
           ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 cagcaggcaggtgggaacaaaagcaggtagcactctgcaatattcagctctcaggaaggc 440

                                                                       
Query: 241 ctcaagtagcaggagccttagctttagaagtgtttgaactcctgtacaggcttagaggtc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcaagtagcaggagccttagctttagaagtgtttgaactcctgtacaggcttagaggtc 500

                                                                       
Query: 301 caagacccttagctttacaagtatttcagctcttgtgtggacctagggagttaggattcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caagacccttagctttacaagtatttcagctcttgtgtggacctagggagttaggattcc 560

                                                                       
Query: 361 taagcccttggtggtaaccagttttaaaacccctagacctggggactgttttgaggaccc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taagcccttggtggtaaccagttttaaaacccctagacctggggactgttttgaggaccc 620

                                                                       
Query: 421 ctggctctaaagacactctactttctgaaactctttgtgaccaaggcctgcagttcctct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctggctctaaagacactctactttctgaaactctttgtgaccaaggcctgcagttcctct 680

                                                                       
Query: 481 tgctggtccctcacaagctccagttcttcagcttcctgccttttctgtatttccacagtt 540
           |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 681 tgctggtccctcacaagctccagttcttcagcttcctgccttttctgtgtttccacggtt 740

                                                                
Query: 541 cctctcattttcaccttgaccaccttcttggattatccagttgctcttgttgc 593
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cctctcattttcaccttgaccaccttcttggattatccagttgctcttgttgc 793


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space:   573089
Effective search space used:   573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)