TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCGCGG
AATTCCCTGCAGATCAACATGAAGATGCCCTTTCATGAATTAATGCAAGG
AGAGAATATAAAGTGGTAGCTCGGTGAGCTCTGCCTCATCCCCCAAATTT
ACAGATAGAGATAGAGTTATATATCTCTGTCTATGTGTATGTATATGCGT
AAGTGTGTAGGTATAAGTGTATTTATGTAAGTATGCATGAACACTTGTGA
AGTTGATAAGACAGGTGGTTGGACCCAACCAGAATGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAANAGAGAGAC
AGAGACAGAGACAGAGGCAGAGAGAGTATGTTTGTCTGTGTAAATGATAT
TCTTTTCTTTACTTTTATCTCTAGTTCATGAAGAGTTAATAAAGTCCAAG
TCTCTCACCTGGGTAGCAAGAGAGGTCCTTGAGCCAGAAAGAAAAGATAC
CTAGCAATTAAGCCCTTTTTCTTCTTAATGCCTTGCTGCTGGACAGCAGG
AGATGATTATCAGAAGCCAGTGGTTTTGGCCTTAGAATAGTAAATCGTTA
TAAATAGAACAAATGCCATATATATATTAAAAAACAACAACAACAAAAAA
GTTGACCACGACCTCTGACTCCATACCCCTTTGATTCATTTTCTCATGAC
CCTTTCTTTTTGGACTGGATTCCCGCAAGATTGCTCTGAAATATGTATGC
CTCATCAAATCCTATTCATTTT

NCCATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAGTAGTATTTTTGTAGATTTTAGTCTC
CCTTTGCTTTGCTTATGCATTTTTAAAACTTATTTACCTTTTGTTTGTAT
GTTTTGATCTTTATTTTTATGGCGGTAATTGTAGGTGTTTCTTGCTTTTG
TTTTGTATTGTTTTTGTTTCCCTGTTTTTGTTTGTTTTCTTAAAGAAAGT
AAAGGAAAATACAGTTGTAGGTAGCATTTTGGGGGGATATAAGAAGAACT
GGATGATAGAAAACATAATAAAACATATTGTCTAAAAATTCATTCAAATT
AAAAATAAAAAGATGAATAAACATAAAATAAAAACCACTGAACCACGGTG
GAAGGTGGGGGAATAGGTACTCAGATTATAGATTAGCCCTATTATTTGTC
TTATATGGATCCACAGGGTGTGAATTCAGGTCCAAAGGCTTCTACTTCAT
GTTCTTTCTTACCCACTGAGGCATGTCCACATTTCAATTAATGCATTTTT
TTTCAGGCAAGAGATATGTCAATAGGCCCAATATCATAATAGAAGTGAAG
AAATACCGGGGAGGGGTTGAATTTAATTATGTTATCTAAAATTGCTCAAT
TCATAGAAGTGAATGAATATAAGTCTAAGATTCTTTGAATGCTTCTAGAA
ATCCATTCCTTTAAGACCTANCAAGAAAAGAGTTTGGGAACAGAAAAGTA
TTTGAAAGCAGGGCGGTGACTAT

Query= MSMg01no520_b10.g1 MSMg01no520_b10.g1 CHROMAT_FILE:
MSMg01no520_b10.g1 PHD_FILE: MSMg01no520_b10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:01 2005
         (641 letters)



>mm_chr3_72187474_72188514
          Length = 1041

 Score = 1230 bits (636), Expect = 0.0
 Identities = 639/640 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtagtatttttgtagattttagtctccctttgctttgcttatgcatttttaaaacttat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 agtagtatttttgtagattttagtctccctttgctttgcttatgcatttttaaaacttat 581

                                                                       
Query: 61  ttaccttttgtttgtatgttttgatctttatttttatggcggtaattgtaggtgtttctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ttaccttttgtttgtatgttttgatctttatttttatggcggtaattgtaggtgtttctt 521

                                                                       
Query: 121 gcttttgttttgtattgtttttgtttccctgtttttgtttgttttcttaaagaaagtaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gcttttgttttgtattgtttttgtttccctgtttttgtttgttttcttaaagaaagtaaa 461

                                                                       
Query: 181 ggaaaatacagttgtaggtagcattttggggggatataagaagaactggatgatagaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ggaaaatacagttgtaggtagcattttggggggatataagaagaactggatgatagaaaa 401

                                                                       
Query: 241 cataataaaacatattgtctaaaaattcattcaaattaaaaataaaaagatgaataaaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cataataaaacatattgtctaaaaattcattcaaattaaaaataaaaagatgaataaaca 341

                                                                       
Query: 301 taaaataaaaaccactgaaccacggtggaaggtgggggaataggtactcagattatagat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 taaaataaaaaccactgaaccacggtggaaggtgggggaataggtactcagattatagat 281

                                                                       
Query: 361 tagccctattatttgtcttatatggatccacagggtgtgaattcaggtccaaaggcttct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tagccctattatttgtcttatatggatccacagggtgtgaattcaggtccaaaggcttct 221

                                                                       
Query: 421 acttcatgttctttcttacccactgaggcatgtccacatttcaattaatgcatttttttt 480
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 220 acttcatgttctttcttacccactgaggcatgtccacatttcaaataatgcatttttttt 161

                                                                       
Query: 481 caggcaagagatatgtcaataggcccaatatcataatagaagtgaagaaataccggggag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 caggcaagagatatgtcaataggcccaatatcataatagaagtgaagaaataccggggag 101

                                                                       
Query: 541 gggttgaatttaattatgttatctaaaattgctcaattcatagaagtgaatgaatataag 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 gggttgaatttaattatgttatctaaaattgctcaattcatagaagtgaatgaatataag 41

                                                   
Query: 601 tctaagattctttgaatgcttctagaaatccattccttta 640
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 40  tctaagattctttgaatgcttctagaaatccattccttta 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space:   650561
Effective search space used:   650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)